Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AL161756.2-201ENST00000604597 246 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AC009229.3-201ENST00000608056 282 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AC090425.1-201ENST00000610007 140 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 MIR6500-201ENST00000622700 86 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AC243312.2-201ENST00000623340 601 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 ASNSP1-201ENST00000518311 1939 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 Y_RNA.5-201ENST00000362334 102 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-1032P-201ENST00000384100 107 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 Y_RNA.452-201ENST00000384202 108 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 AL583834.1-201ENST00000406943 343 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 AC108059.2-201ENST00000434626 151 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 NEFMP1-201ENST00000443423 1006 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 AF213884.1-201ENST00000488102 463 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 MTCO2P24-201ENST00000515611 426 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-764P-201ENST00000516396 105 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 AC008694.2-201ENST00000517591 306 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 AC110588.1-201ENST00000559699 137 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 AL121772.2-201ENST00000614331 297 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 PNPT1P2-201ENST00000456768 2050 ntBASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PRPF40BQ6NWY9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 AC016588.2-201ENST00000632484 3021 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 RNU4-44P-201ENST00000363050 141 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 SNORA73.2-201ENST00000364946 201 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 SNORA23-201ENST00000365128 182 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 RPL29P29-201ENST00000448725 423 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 RPL12P25-201ENST00000455592 494 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 MTATP8P1-201ENST00000467115 207 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 AC006499.6-201ENST00000511169 607 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 RNU2-69P-201ENST00000516061 100 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 Y_RNA.689-201ENST00000516589 107 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-1069P-201ENST00000516612 133 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 AC006157.1-201ENST00000611750 366 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 AC007485.1-201ENST00000616755 206 ntBASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PRPF40BQ6NWY9 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.21□□□□□ -1.57
PRPF40BQ6NWY9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-525P-201ENST00000363685 104 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-328P-201ENST00000390887 106 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AC110754.1-201ENST00000399740 601 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AL590704.1-201ENST00000402856 794 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 RPS4XP7-201ENST00000406274 780 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 RNU4-6P-201ENST00000410804 122 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AC018865.2-201ENST00000423631 129 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AC004866.2-201ENST00000438285 481 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AL590399.6-201ENST00000446396 307 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AC026801.1-201ENST00000497178 464 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 RNU6-840P-201ENST00000517275 65 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 SNORA51-201ENST00000606420 132 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 MIR7151-201ENST00000617477 60 ntBASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PRPF40BQ6NWY9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
PRPF40BQ6NWY9 Y_RNA.527-201ENST00000384573 102 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms