Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RN7SL329P-201ENST00000467740 299 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 AC044860.2-201ENST00000561005 179 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 AC004792.1-201ENST00000614523 137 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 AL731566.2-201ENST00000618971 317 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 AL672167.1-205ENST00000641112 3080 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 RNU6-1249P-201ENST00000363237 111 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.237-201ENST00000364439 102 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 RNU6-1317P-201ENST00000364582 104 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 MIR215-201ENST00000384858 110 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 RNA5SP113-201ENST00000410486 84 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 RNU6-712P-201ENST00000410558 100 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 RPL7AP73-201ENST00000413490 353 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 AL451062.2-201ENST00000427515 271 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 PSMD10P3-201ENST00000437000 448 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 AL392103.1-201ENST00000447000 198 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 AC073587.1-201ENST00000447093 876 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 NDUFB1P2-201ENST00000449477 176 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 AC139769.1-204ENST00000472297 1931 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 GMPSP1-201ENST00000514075 579 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.700-201ENST00000516806 100 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 RN7SKP234-201ENST00000517173 224 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 AP001880.2-201ENST00000538233 448 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 MIR3667-201ENST00000581025 74 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 AC087385.3-201ENST00000620477 187 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 MAPK10-303ENST00000641324 3959 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 MAPK10-349ENST00000641767 3661 ntBASIC5.61□□□□□ -1.51
RNF20Q5VTR2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
RNF20Q5VTR2 AL451142.2-201ENST00000429076 2090 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.54-201ENST00000362766 105 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.274-201ENST00000364714 101 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.297-201ENST00000364950 91 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 U8.8-201ENST00000365399 135 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.534-201ENST00000384599 112 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AL591034.2-201ENST00000402839 359 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 RN7SKP267-201ENST00000410381 285 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 RNU2-71P-201ENST00000411395 189 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AL353621.1-201ENST00000418219 243 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 C4BPAP2-201ENST00000428434 478 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AC133134.1-201ENST00000466800 359 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 RN7SL214P-201ENST00000487317 265 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 RPS15AP34-201ENST00000487776 387 ntBASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RNF20Q5VTR2 AC000123.3-201ENST00000624029 4975 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RNF20Q5VTR2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF20Q5VTR2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RNF20Q5VTR2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF20Q5VTR2 SDAD1P1-202ENST00000524156 2051 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
RNF20Q5VTR2 RPL9P7-201ENST00000330965 580 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 MIR521-1-201ENST00000384902 87 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 RNU6-700P-201ENST00000391043 107 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.592-201ENST00000410274 109 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 BX510359.2-201ENST00000417920 305 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 EIF4EP2-201ENST00000422816 654 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 AL159987.2-201ENST00000432754 307 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF20Q5VTR2 AL513043.1-201ENST00000439124 535 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms