Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RNU2-68P-201ENST00000410878 191 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RPL26P29-201ENST00000415623 438 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 DNAJC19P7-201ENST00000428811 344 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AL358472.1-201ENST00000431295 329 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 WASF1P1-201ENST00000447560 1131 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC008264.1-201ENST00000447612 367 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 SCARNA18-201ENST00000459004 134 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RPL21P41-201ENST00000459863 264 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RN7SL330P-201ENST00000469709 307 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 UQCRHP4-201ENST00000471686 272 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RN7SL481P-201ENST00000477764 299 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RPL32P34-201ENST00000486380 400 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC091167.1-201ENST00000492017 396 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RN7SL604P-201ENST00000492589 296 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC069439.1-201ENST00000494739 167 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC104136.1-201ENST00000512969 394 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RNU6-358P-201ENST00000516564 75 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 CDH12P4-201ENST00000517835 295 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 CDH12P3-201ENST00000517935 295 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 CDH12P1-201ENST00000518435 295 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AP003122.3-201ENST00000526316 255 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC084851.1-201ENST00000529105 249 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC011602.1-201ENST00000546484 331 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AL157871.3-201ENST00000557231 293 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AMZ2P1-203ENST00000565833 850 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 MIR4738-201ENST00000579134 87 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 HSPE1P7-201ENST00000604681 321 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 RMST_3.1-201ENST00000611651 109 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC114781.5-201ENST00000615297 108 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 MIR8059-201ENST00000620427 81 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC099506.2-201ENST00000623074 221 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 Z82217.1-201ENST00000625157 8149 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
RNF220Q5VTB9 LARP1BP1-201ENST00000506036 1359 ntBASIC3.75□□□□□ -1.81
RNF220Q5VTB9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 RNU6-371P-201ENST00000364283 108 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 RNU6-38P-201ENST00000384085 107 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 MIR585-201ENST00000384887 94 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 AC007256.1-201ENST00000392253 2765 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 MIR937-201ENST00000401271 86 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 MIR1251-201ENST00000408552 70 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 HSPE1P12-201ENST00000412576 301 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 EEF1A1P40-201ENST00000412883 573 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 AL158156.1-201ENST00000422509 473 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 MTCO3P18-201ENST00000440206 761 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 RNU6-333P-201ENST00000459117 107 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 AL049830.2-201ENST00000480072 201 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 AC009643.1-201ENST00000532030 391 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 MIR4277-201ENST00000578298 84 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 MIR5692A1-201ENST00000580523 69 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 AL138880.2-201ENST00000616214 239 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 ZNF826P-207ENST00000622273 1910 ntBASIC3.74□□□□□ -1.81
RNF220Q5VTB9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RNF220Q5VTB9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 MFSD8-236ENST00000641509 4050 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 AC007656.2-201ENST00000624902 4547 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 SNORD35B-201ENST00000363660 87 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 RNU6-395P-201ENST00000365662 106 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms