Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC104136.1-201ENST00000512969 394 ntBASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 TRMT10BP1-201ENST00000519377 943 ntBASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 AC063950.1-201ENST00000552036 308 ntBASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 MIR548S-201ENST00000581352 82 ntBASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 MIR4424-201ENST00000585257 86 ntBASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 AC010525.2-201ENST00000590920 195 ntBASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 AC008739.3-201ENST00000603262 127 ntBASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 MIR6868-201ENST00000611215 58 ntBASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 MIR7702-201ENST00000621931 59 ntBASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 AC027309.3-201ENST00000623419 351 ntBASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CCDC144BQ3MJ40 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 SNORA60-201ENST00000362396 134 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 Y_RNA.231-201ENST00000364358 102 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 RNU4-66P-201ENST00000365199 138 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 AL592114.1-201ENST00000403842 483 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 SRIP2-201ENST00000428470 166 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 RPL36AP53-201ENST00000432891 316 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 HMGB3P11-201ENST00000440127 604 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 RPS24P13-201ENST00000442520 397 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 MTND4P18-201ENST00000447010 465 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 FABP5P15-201ENST00000453566 214 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 SNRPGP3-201ENST00000469405 227 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 RPL7P5-201ENST00000471472 736 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 AC069499.1-201ENST00000489433 509 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 MIR5692A1-201ENST00000580523 69 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 MIR3941-201ENST00000582572 103 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 MIR5684-201ENST00000585074 65 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 RMST_3.1-201ENST00000611651 109 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 DUXAP9-208ENST00000622815 614 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 AC009033.1-201ENST00000624279 431 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 AL008636.1-201ENST00000625038 1018 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 Z99571.1-201ENST00000636677 394 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 CASC19-280ENST00000642102 1351 ntBASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC144BQ3MJ40 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 MIR449B-201ENST00000384995 97 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 RAB9AP3-201ENST00000412737 573 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 ERLEC1P1-201ENST00000433806 578 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 MTATP6P23-201ENST00000440153 476 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 RAB9AP1-201ENST00000449393 573 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 RNA5SP310-201ENST00000459084 116 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 PPIAP15-201ENST00000479662 484 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 AC079140.5-201ENST00000507882 310 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 NDUFB4P9-201ENST00000511646 388 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 RNU6-1315P-201ENST00000517187 99 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 CASP1P1-201ENST00000526345 212 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 PSMA2P1-201ENST00000526365 646 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 HMGB1P14-201ENST00000557424 591 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 MIR1273C-201ENST00000578669 77 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 AC002076.2-201ENST00000617362 122 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 MIR6076-201ENST00000617521 113 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 AC006504.8-201ENST00000621046 635 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 AC103858.2-201ENST00000621471 543 ntBASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC144BQ3MJ40 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC144BQ3MJ40 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC144BQ3MJ40 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CCDC144BQ3MJ40 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 RNA5SP387-201ENST00000364226 106 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 SNORA73.2-201ENST00000364946 201 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-38P-201ENST00000384085 107 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 RNU6-876P-201ENST00000391295 104 ntBASIC4.58□□□□□ -1.68
CCDC144BQ3MJ40 UBE2V1P2-201ENST00000397758 440 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms