Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC019129.1-201ENST00000403786 261 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 MIR1261-201ENST00000408659 82 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 RNU4-72P-201ENST00000410754 173 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC068533.2-201ENST00000411872 306 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 TPMTP2-201ENST00000414372 726 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 SPA17P1-201ENST00000416656 452 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.71□□□□□ -2.14
FOXF1Q12946 AL445685.2-201ENST00000422551 342 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC009414.1-201ENST00000427200 443 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.71□□□□□ -2.14
FOXF1Q12946 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXF1Q12946 GTF2IP3-201ENST00000433887 494 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC003989.2-201ENST00000440224 169 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 MTCO2P25-201ENST00000447065 681 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 FABP5P13-201ENST00000452144 328 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 SNORD121B-201ENST00000458838 81 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC079203.1-201ENST00000487972 404 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.71□□□□□ -2.14
FOXF1Q12946 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXF1Q12946 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.71□□□□□ -2.14
FOXF1Q12946 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.71□□□□□ -2.14
FOXF1Q12946 RNU6-583P-201ENST00000516012 92 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.71□□□□□ -2.14
FOXF1Q12946 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXF1Q12946 MTND1P36-201ENST00000522384 936 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 LRRC6P1-201ENST00000532188 885 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC005832.3-201ENST00000537929 631 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.71□□□□□ -2.14
FOXF1Q12946 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXF1Q12946 AC090888.1-201ENST00000561335 1141 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.71□□□□□ -2.14
FOXF1Q12946 AL353997.4-201ENST00000586196 166 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXF1Q12946 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
FOXF1Q12946 AC009318.2-201ENST00000610917 651 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 DUXAP10-204ENST00000612052 616 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AL138478.1-201ENST00000612252 832 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC079395.3-201ENST00000615161 484 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC123767.1-202ENST00000620407 817 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 AC002550.2-201ENST00000621246 394 ntBASIC1.71□□□□□ -2.14
FOXF1Q12946 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
FOXF1Q12946 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.71□□□□□ -2.14
FOXF1Q12946 AL049641.1-201ENST00000441055 1948 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
FOXF1Q12946 RNU5A-1-201ENST00000362698 116 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 RNU6-461P-201ENST00000364195 107 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 SNORA68.1-201ENST00000364537 132 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
FOXF1Q12946 RNU6-224P-201ENST00000384055 107 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 RNU6-1122P-201ENST00000384449 107 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 RNU6-298P-201ENST00000390888 96 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 DHFRP6-201ENST00000401776 268 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AL355497.1-201ENST00000406262 551 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 RNU2-42P-201ENST00000410697 113 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AC069282.1-201ENST00000411911 526 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 TPMTP3-201ENST00000411928 735 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AL161449.1-201ENST00000414531 1199 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 Z85995.1-201ENST00000415547 335 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 PPP1R11P2-201ENST00000423543 382 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXF1Q12946 AL512844.2-201ENST00000433990 593 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.7□□□□□ -2.14
FOXF1Q12946 FGF7P5-201ENST00000441829 291 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 RPS15AP27-201ENST00000449183 343 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 MTND1P9-201ENST00000453775 944 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 RPL18AP17-201ENST00000455326 198 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 TRBV1-201ENST00000476502 284 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AC072039.1-201ENST00000477611 581 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AC007182.2-201ENST00000489251 402 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.7□□□□□ -2.14
FOXF1Q12946 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.7□□□□□ -2.14
FOXF1Q12946 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.7□□□□□ -2.14
FOXF1Q12946 SCARNA15.2-201ENST00000516409 127 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 RNU6-528P-201ENST00000516926 100 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 SNORA31.22-201ENST00000517204 135 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.7□□□□□ -2.14
FOXF1Q12946 AC010376.1-201ENST00000522101 334 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.7□□□□□ -2.14
FOXF1Q12946 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.7□□□□□ -2.14
FOXF1Q12946 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.7□□□□□ -2.14
FOXF1Q12946 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXF1Q12946 AC005832.2-201ENST00000538921 1430 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXF1Q12946 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXF1Q12946 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXF1Q12946 AC110588.1-201ENST00000559699 137 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AL138976.2-201ENST00000563989 694 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXF1Q12946 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.7□□□□□ -2.14
FOXF1Q12946 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXF1Q12946 OR1M4P-201ENST00000589199 287 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AC068790.3-201ENST00000602988 553 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AL390208.1-201ENST00000605885 644 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AC009237.15-201ENST00000610252 501 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
FOXF1Q12946 AC104763.3-201ENST00000613765 618 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 AC098657.3-201ENST00000620434 263 ntBASIC1.7□□□□□ -2.14
FOXF1Q12946 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms