Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL353689.1-201ENST00000438895 199 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 AL022238.1-201ENST00000442557 355 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.77□□□□□ -2.29
TFF3Q07654 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.77□□□□□ -2.29
TFF3Q07654 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.77□□□□□ -2.29
TFF3Q07654 SUB1P4-201ENST00000566062 339 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 MIR4299-201ENST00000577899 72 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 MIR3616-201ENST00000584070 92 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 AC021646.1-201ENST00000605469 484 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 AC108706.1-201ENST00000611053 297 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC0.77□□□□□ -2.29
TFF3Q07654 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TFF3Q07654 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
TFF3Q07654 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
TFF3Q07654 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.77□□□□□ -2.29
TFF3Q07654 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
TFF3Q07654 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
TFF3Q07654 CBX3P1-201ENST00000325243 554 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 MIR126-201ENST00000362291 85 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.76□□□□□ -2.29
TFF3Q07654 AC004022.2-201ENST00000413824 193 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.76□□□□□ -2.29
TFF3Q07654 MRPL35P3-201ENST00000421557 364 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 SFR1P2-201ENST00000421841 730 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.76□□□□□ -2.29
TFF3Q07654 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.76□□□□□ -2.29
TFF3Q07654 RPL23AP3-201ENST00000453844 468 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 AC021382.1-201ENST00000483523 359 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.76□□□□□ -2.29
TFF3Q07654 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.76□□□□□ -2.29
TFF3Q07654 SNORA31.20-201ENST00000517111 133 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 AC109635.4-202ENST00000531666 412 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.76□□□□□ -2.29
TFF3Q07654 AC079148.1-201ENST00000565944 819 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 MTND2P13-201ENST00000577438 1039 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 MIR4714-201ENST00000580728 77 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.76□□□□□ -2.29
TFF3Q07654 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 AL020996.3-201ENST00000606617 222 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TFF3Q07654 AC020923.1-201ENST00000624021 917 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 AC068880.5-201ENST00000624331 290 ntBASIC0.76□□□□□ -2.29
TFF3Q07654 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.76□□□□□ -2.29
TFF3Q07654 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.76□□□□□ -2.29
TFF3Q07654 AC010889.1-201ENST00000566193 2666 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 NR1H5P-201ENST00000452683 1377 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 DDX43P2-201ENST00000604753 1354 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TFF3Q07654 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
TFF3Q07654 MIR934-201ENST00000401241 83 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 AL356432.1-201ENST00000405809 419 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.75□□□□□ -2.29
TFF3Q07654 CYCSP48-201ENST00000417124 323 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.75□□□□□ -2.29
TFF3Q07654 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.75□□□□□ -2.29
TFF3Q07654 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.75□□□□□ -2.29
TFF3Q07654 SUMO2P2-201ENST00000456482 255 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.75□□□□□ -2.29
TFF3Q07654 SNORA31.25-201ENST00000517242 134 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.75□□□□□ -2.29
TFF3Q07654 AC008676.3-201ENST00000521237 435 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 AC025165.5-201ENST00000602802 578 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 AL592148.2-201ENST00000612210 372 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 MIR7973-1-201ENST00000614683 76 ntBASIC0.75□□□□□ -2.29
TFF3Q07654 AC008669.1-201ENST00000565823 2178 ntBASIC0.74□□□□□ -2.29
TFF3Q07654 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.74□□□□□ -2.29
TFF3Q07654 RNU6-939P-201ENST00000384634 107 ntBASIC0.74□□□□□ -2.29
TFF3Q07654 MIR216A-201ENST00000385063 110 ntBASIC0.74□□□□□ -2.29
TFF3Q07654 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.74□□□□□ -2.29
TFF3Q07654 THAP5P1-201ENST00000439089 262 ntBASIC0.74□□□□□ -2.29
TFF3Q07654 AC114801.2-201ENST00000503825 781 ntBASIC0.74□□□□□ -2.29
TFF3Q07654 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.74□□□□□ -2.29
TFF3Q07654 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.74□□□□□ -2.29
TFF3Q07654 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.74□□□□□ -2.29
TFF3Q07654 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.74□□□□□ -2.29
TFF3Q07654 AC112191.3-201ENST00000604371 277 ntBASIC0.74□□□□□ -2.29
TFF3Q07654 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.74□□□□□ -2.29
TFF3Q07654 MIR6076-201ENST00000617521 113 ntBASIC0.74□□□□□ -2.29
TFF3Q07654 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.74□□□□□ -2.29
TFF3Q07654 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.74□□□□□ -2.29
TFF3Q07654 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.74□□□□□ -2.29
TFF3Q07654 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.74□□□□□ -2.29
TFF3Q07654 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
TFF3Q07654 ICE2P2-201ENST00000483823 2787 ntBASIC0.74□□□□□ -2.29
TFF3Q07654 DEFB108F-201ENST00000344638 222 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 RNU4-41P-201ENST00000364426 143 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 RNU6-1187P-201ENST00000364771 110 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 RNY1P4-201ENST00000384595 115 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 RPL30P13-201ENST00000418873 348 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 UBE2D3P2-201ENST00000424409 445 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC0.73□□□□□ -2.29
TFF3Q07654 RNF2P1-201ENST00000442955 1010 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 RPS27P23-201ENST00000487608 251 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.73□□□□□ -2.29
TFF3Q07654 AC021087.2-201ENST00000504656 1203 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 HMGB1P22-201ENST00000505315 124 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 AC093770.1-201ENST00000511559 571 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 MIR449C-201ENST00000516047 92 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms