Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 RPL21P109-201ENST00000422213 475 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AC133104.1-201ENST00000429100 218 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 DLGAP5P1-201ENST00000430307 464 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 RPL23AP69-201ENST00000431134 458 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.57□□□□□ -1.84
UBE3AQ05086 NANOGNBP1-201ENST00000448444 480 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AC079448.1-201ENST00000449377 373 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 RNU6-420P-201ENST00000458780 107 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AC087588.1-201ENST00000462203 316 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AL160314.1-201ENST00000490836 438 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AC006445.1-201ENST00000491925 405 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.57□□□□□ -1.84
UBE3AQ05086 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.57□□□□□ -1.84
UBE3AQ05086 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.57□□□□□ -1.84
UBE3AQ05086 SNORA31.3-201ENST00000516029 96 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 RNU6-1282P-201ENST00000516735 96 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.57□□□□□ -1.84
UBE3AQ05086 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.57□□□□□ -1.84
UBE3AQ05086 AP003392.2-201ENST00000527269 208 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.57□□□□□ -1.84
UBE3AQ05086 AC091152.2-201ENST00000591628 2569 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AC091805.2-201ENST00000603848 235 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 HSPE1P7-201ENST00000604681 321 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 AC034102.8-201ENST00000615146 484 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
UBE3AQ05086 AC099842.1-201ENST00000619919 596 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.57□□□□□ -1.84
UBE3AQ05086 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBE3AQ05086 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
UBE3AQ05086 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
UBE3AQ05086 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBE3AQ05086 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.56□□□□□ -1.84
UBE3AQ05086 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBE3AQ05086 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
UBE3AQ05086 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE3AQ05086 SMIM11P1-201ENST00000369586 178 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 MIR591-201ENST00000385290 95 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AL138885.1-201ENST00000405921 675 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 RNU6-1077P-201ENST00000410506 102 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE3AQ05086 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.56□□□□□ -1.84
UBE3AQ05086 MED13P1-201ENST00000428342 171 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 USP9YP14-201ENST00000430663 563 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.56□□□□□ -1.84
UBE3AQ05086 AL358934.1-201ENST00000432346 324 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE3AQ05086 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.56□□□□□ -1.84
UBE3AQ05086 AL135752.1-201ENST00000479477 471 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 RPL23AP94-201ENST00000512518 302 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.56□□□□□ -1.84
UBE3AQ05086 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE3AQ05086 SCARNA24.1-201ENST00000516465 137 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE3AQ05086 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
UBE3AQ05086 AC026333.2-201ENST00000542164 106 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.56□□□□□ -1.84
UBE3AQ05086 HIGD1AP1-201ENST00000550979 275 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE3AQ05086 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.56□□□□□ -1.84
UBE3AQ05086 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.56□□□□□ -1.84
UBE3AQ05086 MIR3609-201ENST00000582661 80 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AC004223.2-201ENST00000590309 544 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.56□□□□□ -1.84
UBE3AQ05086 AC007363.1-201ENST00000604736 620 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AC093732.2-201ENST00000607950 274 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 Z99129.1-201ENST00000612510 255 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
UBE3AQ05086 AL356321.1-201ENST00000621360 228 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AC007998.5-201ENST00000622938 237 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AC068880.5-201ENST00000624331 290 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 LRRC77P-213ENST00000637727 880 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 AC068137.4-201ENST00000638485 296 ntBASIC3.56□□□□□ -1.84
UBE3AQ05086 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
UBE3AQ05086 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
UBE3AQ05086 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE3AQ05086 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE3AQ05086 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE3AQ05086 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE3AQ05086 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.55□□□□□ -1.84
UBE3AQ05086 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.55□□□□□ -1.84
UBE3AQ05086 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBE3AQ05086 RNU5A-6P-201ENST00000384136 116 ntBASIC3.55□□□□□ -1.84
UBE3AQ05086 EI24P2-201ENST00000397776 1076 ntBASIC3.55□□□□□ -1.84
UBE3AQ05086 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.55□□□□□ -1.84
UBE3AQ05086 AC012498.1-201ENST00000424037 437 ntBASIC3.55□□□□□ -1.84
UBE3AQ05086 AC104651.1-201ENST00000427559 735 ntBASIC3.55□□□□□ -1.84
UBE3AQ05086 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.55□□□□□ -1.84
UBE3AQ05086 BNIP3P2-201ENST00000441221 577 ntBASIC3.55□□□□□ -1.84
UBE3AQ05086 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.55□□□□□ -1.84
UBE3AQ05086 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.55□□□□□ -1.84
UBE3AQ05086 AC007182.2-201ENST00000489251 402 ntBASIC3.55□□□□□ -1.84
UBE3AQ05086 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.55□□□□□ -1.84
UBE3AQ05086 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.55□□□□□ -1.84
UBE3AQ05086 RNA5SP290-201ENST00000517133 127 ntBASIC3.55□□□□□ -1.84
UBE3AQ05086 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
UBE3AQ05086 AC090572.1-201ENST00000519251 160 ntBASIC3.55□□□□□ -1.84
UBE3AQ05086 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.55□□□□□ -1.84
UBE3AQ05086 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.55□□□□□ -1.84
UBE3AQ05086 HMGB1P14-201ENST00000557424 591 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms