Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.35□□□□□ -1.71
YBX1P67809 RNU6-677P-201ENST00000516914 101 ntBASIC4.35□□□□□ -1.71
YBX1P67809 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.35□□□□□ -1.71
YBX1P67809 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
YBX1P67809 AC007991.1-201ENST00000522680 631 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AP006587.4-201ENST00000526053 529 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AC009643.1-201ENST00000532030 391 ntBASIC4.35□□□□□ -1.71
YBX1P67809 MIR4715-201ENST00000584117 79 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AL355812.1-201ENST00000603215 216 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AC104763.2-201ENST00000604179 382 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AL034351.1-201ENST00000605288 668 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AL355810.1-201ENST00000614629 552 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AC131238.1-201ENST00000617135 328 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AL138825.1-201ENST00000618587 192 ntBASIC4.35□□□□□ -1.71
YBX1P67809 MIR7154-201ENST00000620673 73 ntBASIC4.35□□□□□ -1.71
YBX1P67809 MIR4272-201ENST00000635924 64 ntBASIC4.35□□□□□ -1.71
YBX1P67809 U6.104-201ENST00000637979 90 ntBASIC4.35□□□□□ -1.71
YBX1P67809 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.35□□□□□ -1.71
YBX1P67809 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
YBX1P67809 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
YBX1P67809 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.35□□□□□ -1.71
YBX1P67809 CPHL1P-201ENST00000461341 3407 ntBASIC4.35□□□□□ -1.71
YBX1P67809 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
YBX1P67809 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
YBX1P67809 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
YBX1P67809 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.35□□□□□ -1.71
YBX1P67809 AC139713.2-214ENST00000642059 1811 ntBASIC4.35□□□□□ -1.71
YBX1P67809 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
YBX1P67809 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
YBX1P67809 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
YBX1P67809 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
YBX1P67809 AC016588.2-201ENST00000632484 3021 ntBASIC4.34□□□□□ -1.71
YBX1P67809 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
YBX1P67809 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.34□□□□□ -1.71
YBX1P67809 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
YBX1P67809 MIR129-1-201ENST00000384972 72 ntBASIC4.34□□□□□ -1.71
YBX1P67809 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
YBX1P67809 RNU2-38P-201ENST00000410856 79 ntBASIC4.34□□□□□ -1.71
YBX1P67809 AC092447.6-201ENST00000414578 210 ntBASIC4.34□□□□□ -1.71
YBX1P67809 AC099677.1-201ENST00000420575 175 ntBASIC4.34□□□□□ -1.71
YBX1P67809 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.34□□□□□ -1.71
YBX1P67809 AL732292.1-201ENST00000426692 226 ntBASIC4.34□□□□□ -1.71
YBX1P67809 AL353997.1-201ENST00000432936 108 ntBASIC4.34□□□□□ -1.71
YBX1P67809 RPS3AP12-201ENST00000443616 753 ntBASIC4.34□□□□□ -1.71
YBX1P67809 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.34□□□□□ -1.71
YBX1P67809 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.34□□□□□ -1.71
YBX1P67809 RPL17P19-201ENST00000489069 552 ntBASIC4.34□□□□□ -1.71
YBX1P67809 AC018437.1-201ENST00000492214 406 ntBASIC4.34□□□□□ -1.71
YBX1P67809 RN7SKP277-201ENST00000516895 283 ntBASIC4.34□□□□□ -1.71
YBX1P67809 RN7SKP60-201ENST00000516985 239 ntBASIC4.34□□□□□ -1.71
YBX1P67809 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.34□□□□□ -1.71
YBX1P67809 AC104576.1-201ENST00000524225 88 ntBASIC4.34□□□□□ -1.71
YBX1P67809 AC100770.1-201ENST00000532310 322 ntBASIC4.34□□□□□ -1.71
YBX1P67809 HSPE1P20-201ENST00000538133 289 ntBASIC4.34□□□□□ -1.71
YBX1P67809 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.34□□□□□ -1.71
YBX1P67809 MIR4458-201ENST00000578872 75 ntBASIC4.34□□□□□ -1.71
YBX1P67809 MIR5188-201ENST00000583467 113 ntBASIC4.34□□□□□ -1.71
YBX1P67809 ELOCP5-201ENST00000604924 333 ntBASIC4.34□□□□□ -1.71
YBX1P67809 AC027287.1-201ENST00000553115 1453 ntBASIC4.34□□□□□ -1.71
YBX1P67809 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
YBX1P67809 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
YBX1P67809 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
YBX1P67809 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.34□□□□□ -1.72
YBX1P67809 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
YBX1P67809 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
YBX1P67809 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.33□□□□□ -1.72
YBX1P67809 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.33□□□□□ -1.72
YBX1P67809 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.33□□□□□ -1.72
YBX1P67809 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.33□□□□□ -1.72
YBX1P67809 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
YBX1P67809 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
YBX1P67809 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
YBX1P67809 AL359893.1-201ENST00000447628 1580 ntBASIC4.33□□□□□ -1.72
YBX1P67809 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
YBX1P67809 OR56A5-201ENST00000340110 738 ntBASIC4.33□□□□□ -1.72
YBX1P67809 RNU1-35P-201ENST00000362782 153 ntBASIC4.33□□□□□ -1.72
YBX1P67809 Y_RNA.214-201ENST00000364201 112 ntBASIC4.33□□□□□ -1.72
YBX1P67809 RNU6-1303P-201ENST00000364841 107 ntBASIC4.33□□□□□ -1.72
YBX1P67809 Y_RNA.376-201ENST00000365638 108 ntBASIC4.33□□□□□ -1.72
YBX1P67809 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
YBX1P67809 MIR1193-201ENST00000408109 78 ntBASIC4.33□□□□□ -1.72
YBX1P67809 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.33□□□□□ -1.72
YBX1P67809 RNU6-1156P-201ENST00000410365 100 ntBASIC4.33□□□□□ -1.72
YBX1P67809 SYF2P2-201ENST00000417620 583 ntBASIC4.33□□□□□ -1.72
YBX1P67809 CYP4F29P-201ENST00000420685 446 ntBASIC4.33□□□□□ -1.72
YBX1P67809 ELOCP20-201ENST00000422460 345 ntBASIC4.33□□□□□ -1.72
YBX1P67809 AL391219.1-201ENST00000422570 483 ntBASIC4.33□□□□□ -1.72
YBX1P67809 BX276092.3-201ENST00000424182 230 ntBASIC4.33□□□□□ -1.72
YBX1P67809 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.33□□□□□ -1.72
YBX1P67809 MTND5P15-201ENST00000434246 349 ntBASIC4.33□□□□□ -1.72
YBX1P67809 CHEK2P4-201ENST00000450340 246 ntBASIC4.33□□□□□ -1.72
YBX1P67809 MTCO3P8-201ENST00000453691 755 ntBASIC4.33□□□□□ -1.72
YBX1P67809 PCMTD1P1-201ENST00000455560 355 ntBASIC4.33□□□□□ -1.72
YBX1P67809 RNU7-138P-201ENST00000459479 64 ntBASIC4.33□□□□□ -1.72
YBX1P67809 HMGB1P25-201ENST00000468402 607 ntBASIC4.33□□□□□ -1.72
YBX1P67809 AC087385.1-201ENST00000475062 312 ntBASIC4.33□□□□□ -1.72
YBX1P67809 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
YBX1P67809 AC083829.1-201ENST00000503756 657 ntBASIC4.33□□□□□ -1.72
YBX1P67809 HMGB3P17-201ENST00000504195 649 ntBASIC4.33□□□□□ -1.72
YBX1P67809 RN7SKP21-201ENST00000516503 220 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms