Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 Z73417.1-201ENST00000447373 778 ntBASIC0.32□□□□□ -2.36
RPL39P62891 AC068781.1-201ENST00000488231 618 ntBASIC0.32□□□□□ -2.36
RPL39P62891 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.32□□□□□ -2.36
RPL39P62891 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
RPL39P62891 AF131216.2-201ENST00000512316 564 ntBASIC0.32□□□□□ -2.36
RPL39P62891 SCARNA17.1-201ENST00000516211 143 ntBASIC0.32□□□□□ -2.36
RPL39P62891 SCARNA17.2-201ENST00000516334 143 ntBASIC0.32□□□□□ -2.36
RPL39P62891 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.32□□□□□ -2.36
RPL39P62891 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.32□□□□□ -2.36
RPL39P62891 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.32□□□□□ -2.36
RPL39P62891 MIR4713-201ENST00000582691 75 ntBASIC0.32□□□□□ -2.36
RPL39P62891 AL355472.4-201ENST00000610233 626 ntBASIC0.32□□□□□ -2.36
RPL39P62891 SCARNA17.4-201ENST00000614296 143 ntBASIC0.32□□□□□ -2.36
RPL39P62891 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
RPL39P62891 AL022578.1-201ENST00000439330 1433 ntBASIC0.31□□□□□ -2.36
RPL39P62891 RNU6-1032P-201ENST00000384100 107 ntBASIC0.31□□□□□ -2.36
RPL39P62891 U3.20-201ENST00000390909 217 ntBASIC0.31□□□□□ -2.36
RPL39P62891 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.31□□□□□ -2.36
RPL39P62891 MED6P1-201ENST00000439659 713 ntBASIC0.31□□□□□ -2.36
RPL39P62891 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.31□□□□□ -2.36
RPL39P62891 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL035666.1-201ENST00000446195 348 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.31□□□□□ -2.36
RPL39P62891 AL513343.1-201ENST00000451818 792 ntBASIC0.31□□□□□ -2.36
RPL39P62891 TOMM22P6-201ENST00000465035 409 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC0.31□□□□□ -2.36
RPL39P62891 RNA5SP384-201ENST00000516615 116 ntBASIC0.31□□□□□ -2.36
RPL39P62891 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.31□□□□□ -2.36
RPL39P62891 AP006587.4-201ENST00000526053 529 ntBASIC0.31□□□□□ -2.36
RPL39P62891 SMILR-201ENST00000533992 553 ntTSL 4 BASIC0.31□□□□□ -2.36
RPL39P62891 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.31□□□□□ -2.36
RPL39P62891 AC008015.1-201ENST00000555505 465 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AC136932.1-201ENST00000574771 208 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.6-201ENST00000603753 252 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.11-201ENST00000604059 253 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.10-201ENST00000604330 253 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AC008162.1-201ENST00000604718 254 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.1-201ENST00000604752 252 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.2-201ENST00000604983 252 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.5-201ENST00000605253 252 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.4-201ENST00000605279 254 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.12-201ENST00000605291 253 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.8-201ENST00000605353 252 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.9-201ENST00000605428 253 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL359821.1-201ENST00000605519 182 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL670379.7-201ENST00000605823 252 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AL020996.3-201ENST00000606617 222 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.31□□□□□ -2.36
RPL39P62891 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.31□□□□□ -2.36
RPL39P62891 SDAD1P2-201ENST00000441308 2028 ntBASIC0.31□□□□□ -2.36
RPL39P62891 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.31□□□□□ -2.36
RPL39P62891 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.3□□□□□ -2.36
RPL39P62891 MIR96-201ENST00000362288 78 ntBASIC0.3□□□□□ -2.36
RPL39P62891 RNA5SP499-201ENST00000363982 119 ntBASIC0.3□□□□□ -2.36
RPL39P62891 SNORA8-201ENST00000384574 139 ntBASIC0.3□□□□□ -2.36
RPL39P62891 SNORA1.3-201ENST00000384676 136 ntBASIC0.3□□□□□ -2.36
RPL39P62891 RNU6-482P-201ENST00000391068 107 ntBASIC0.3□□□□□ -2.36
RPL39P62891 AC009518.2-201ENST00000418056 731 ntBASIC0.3□□□□□ -2.36
RPL39P62891 AC097463.2-201ENST00000421074 142 ntBASIC0.3□□□□□ -2.36
RPL39P62891 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.3□□□□□ -2.36
RPL39P62891 AC104058.1-201ENST00000448028 297 ntBASIC0.3□□□□□ -2.36
RPL39P62891 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.3□□□□□ -2.36
RPL39P62891 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.3□□□□□ -2.36
RPL39P62891 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.3□□□□□ -2.36
RPL39P62891 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.3□□□□□ -2.36
RPL39P62891 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.3□□□□□ -2.36
RPL39P62891 AC109446.2-201ENST00000567872 497 ntBASIC0.3□□□□□ -2.36
RPL39P62891 AC011260.1-201ENST00000578420 472 ntBASIC0.3□□□□□ -2.36
RPL39P62891 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
RPL39P62891 UCA1.1-201ENST00000620952 75 ntBASIC0.3□□□□□ -2.36
RPL39P62891 AC233981.2-201ENST00000611524 1614 ntBASIC0.29□□□□□ -2.36
RPL39P62891 NACAP2-201ENST00000318548 624 ntBASIC0.29□□□□□ -2.36
RPL39P62891 RNU1-36P-201ENST00000365130 165 ntBASIC0.29□□□□□ -2.36
RPL39P62891 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
RPL39P62891 RPS15AP12-201ENST00000419498 388 ntBASIC0.29□□□□□ -2.36
RPL39P62891 RPL21P32-201ENST00000419877 477 ntBASIC0.29□□□□□ -2.36
RPL39P62891 AC114737.2-201ENST00000421583 173 ntBASIC0.29□□□□□ -2.36
RPL39P62891 AC009414.1-201ENST00000427200 443 ntBASIC0.29□□□□□ -2.36
RPL39P62891 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.29□□□□□ -2.36
RPL39P62891 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.29□□□□□ -2.36
RPL39P62891 AC015908.1-201ENST00000478739 476 ntBASIC0.29□□□□□ -2.36
RPL39P62891 HMGB1P36-201ENST00000487709 576 ntBASIC0.29□□□□□ -2.36
RPL39P62891 OR9N1P-202ENST00000494289 481 ntBASIC0.29□□□□□ -2.36
RPL39P62891 RPS27AP10-201ENST00000496103 208 ntBASIC0.29□□□□□ -2.36
RPL39P62891 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.29□□□□□ -2.36
RPL39P62891 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC0.29□□□□□ -2.36
RPL39P62891 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC0.29□□□□□ -2.36
RPL39P62891 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.29□□□□□ -2.36
RPL39P62891 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.29□□□□□ -2.36
RPL39P62891 CYP3A137P-201ENST00000562436 69 ntBASIC0.29□□□□□ -2.36
RPL39P62891 AC022254.1-201ENST00000567857 235 ntBASIC0.29□□□□□ -2.36
RPL39P62891 AC005786.1-201ENST00000588553 154 ntBASIC0.29□□□□□ -2.36
RPL39P62891 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.29□□□□□ -2.36
RPL39P62891 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.29□□□□□ -2.36
RPL39P62891 AL121890.5-201ENST00000620848 304 ntBASIC0.29□□□□□ -2.36
RPL39P62891 AP002791.1-201ENST00000623291 381 ntBASIC0.29□□□□□ -2.36
RPL39P62891 AC068700.1-201ENST00000565862 3754 ntBASIC0.29□□□□□ -2.36
RPL39P62891 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.29□□□□□ -2.36
RPL39P62891 AL117342.1-201ENST00000404861 406 ntBASIC0.28□□□□□ -2.36
RPL39P62891 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms