Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 MTCO1P12-201ENST00000414273 1543 ntBASIC1.01□□□□□ -2.25
RPS28P62857 SNORA25.8-201ENST00000364831 128 ntBASIC1.01□□□□□ -2.25
RPS28P62857 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
RPS28P62857 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
RPS28P62857 MIR621-201ENST00000384919 96 ntBASIC1.01□□□□□ -2.25
RPS28P62857 MIR27B-201ENST00000385129 97 ntBASIC1.01□□□□□ -2.25
RPS28P62857 RNA5SP501-201ENST00000410990 112 ntBASIC1.01□□□□□ -2.25
RPS28P62857 UBE2FP1-201ENST00000416536 447 ntBASIC1.01□□□□□ -2.25
RPS28P62857 AL353621.1-201ENST00000418219 243 ntBASIC1.01□□□□□ -2.25
RPS28P62857 TEX41-203ENST00000420472 765 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 AL121578.1-201ENST00000428051 892 ntBASIC1.01□□□□□ -2.25
RPS28P62857 TOMM22P2-201ENST00000430735 237 ntBASIC1.01□□□□□ -2.25
RPS28P62857 AL691517.1-201ENST00000440833 1235 ntBASIC1.01□□□□□ -2.25
RPS28P62857 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 AC245102.2-201ENST00000448956 180 ntBASIC1.01□□□□□ -2.25
RPS28P62857 MTND2P6-201ENST00000455337 1030 ntBASIC1.01□□□□□ -2.25
RPS28P62857 AC008481.1-201ENST00000463278 396 ntBASIC1.01□□□□□ -2.25
RPS28P62857 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 AC099513.1-201ENST00000490423 301 ntBASIC1.01□□□□□ -2.25
RPS28P62857 AK6-203ENST00000502819 743 ntTSL 5 BASIC1.01□□□□□ -2.25
RPS28P62857 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
RPS28P62857 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.01□□□□□ -2.25
RPS28P62857 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 MIR4489-201ENST00000578869 62 ntBASIC1.01□□□□□ -2.25
RPS28P62857 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.01□□□□□ -2.25
RPS28P62857 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 AC005000.2-201ENST00000605468 310 ntBASIC1.01□□□□□ -2.25
RPS28P62857 MIR6875-201ENST00000617506 72 ntBASIC1.01□□□□□ -2.25
RPS28P62857 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.01□□□□□ -2.25
RPS28P62857 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.01□□□□□ -2.25
RPS28P62857 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS28P62857 AL590396.4-201ENST00000636779 956 ntBASIC1.01□□□□□ -2.25
RPS28P62857 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.01□□□□□ -2.25
RPS28P62857 MIR1910-201ENST00000636955 80 ntBASIC1.01□□□□□ -2.25
RPS28P62857 AC091812.1-201ENST00000432235 1948 ntBASIC1.01□□□□□ -2.25
RPS28P62857 RNU6-661P-201ENST00000362409 107 ntBASIC1□□□□□ -2.25
RPS28P62857 RNU6-839P-201ENST00000363347 108 ntBASIC1□□□□□ -2.25
RPS28P62857 RNA5SP505-201ENST00000364748 108 ntBASIC1□□□□□ -2.25
RPS28P62857 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1□□□□□ -2.25
RPS28P62857 RNU6-658P-201ENST00000384606 106 ntBASIC1□□□□□ -2.25
RPS28P62857 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
RPS28P62857 BTF3L4P3-201ENST00000418879 476 ntBASIC1□□□□□ -2.25
RPS28P62857 OFD1P2Y-201ENST00000421895 1149 ntBASIC1□□□□□ -2.25
RPS28P62857 CHEK2P5-201ENST00000423877 246 ntBASIC1□□□□□ -2.25
RPS28P62857 VN1R108P-201ENST00000431580 830 ntBASIC1□□□□□ -2.25
RPS28P62857 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1□□□□□ -2.25
RPS28P62857 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1□□□□□ -2.25
RPS28P62857 AC015922.2-201ENST00000435593 184 ntBASIC1□□□□□ -2.25
RPS28P62857 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1□□□□□ -2.25
RPS28P62857 AC234064.1-201ENST00000436312 247 ntBASIC1□□□□□ -2.25
RPS28P62857 AC005019.1-201ENST00000436455 431 ntBASIC1□□□□□ -2.25
RPS28P62857 HSFY6P-201ENST00000445573 403 ntBASIC1□□□□□ -2.25
RPS28P62857 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1□□□□□ -2.25
RPS28P62857 ARPC3P5-201ENST00000448802 534 ntBASIC1□□□□□ -2.25
RPS28P62857 AC091959.2-201ENST00000477363 321 ntBASIC1□□□□□ -2.25
RPS28P62857 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1□□□□□ -2.25
RPS28P62857 AC008837.1-201ENST00000511513 412 ntBASIC1□□□□□ -2.25
RPS28P62857 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1□□□□□ -2.25
RPS28P62857 CYCSP27-201ENST00000527643 293 ntBASIC1□□□□□ -2.25
RPS28P62857 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC1□□□□□ -2.25
RPS28P62857 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1□□□□□ -2.25
RPS28P62857 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1□□□□□ -2.25
RPS28P62857 MIR3939-201ENST00000582614 106 ntBASIC1□□□□□ -2.25
RPS28P62857 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1□□□□□ -2.25
RPS28P62857 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1□□□□□ -2.25
RPS28P62857 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1□□□□□ -2.25
RPS28P62857 BBIP1P1-201ENST00000602999 279 ntBASIC1□□□□□ -2.25
RPS28P62857 AC087045.1-201ENST00000605856 382 ntBASIC1□□□□□ -2.25
RPS28P62857 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1□□□□□ -2.25
RPS28P62857 MIR8074-201ENST00000615081 81 ntBASIC1□□□□□ -2.25
RPS28P62857 AC006213.5-201ENST00000619673 288 ntBASIC1□□□□□ -2.25
RPS28P62857 AC079416.3-201ENST00000624479 549 ntBASIC1□□□□□ -2.25
RPS28P62857 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC1□□□□□ -2.25
RPS28P62857 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
RPS28P62857 AC024341.1-201ENST00000526444 1552 ntBASIC1□□□□□ -2.25
RPS28P62857 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.99□□□□□ -2.25
RPS28P62857 ZNF680P1-201ENST00000436625 1469 ntBASIC0.99□□□□□ -2.25
RPS28P62857 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC0.99□□□□□ -2.25
RPS28P62857 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC0.99□□□□□ -2.25
RPS28P62857 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.99□□□□□ -2.25
RPS28P62857 RNA5SP435-201ENST00000364044 108 ntBASIC0.99□□□□□ -2.25
RPS28P62857 U3.12-201ENST00000364498 214 ntBASIC0.99□□□□□ -2.25
RPS28P62857 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
RPS28P62857 RNU6-439P-201ENST00000384188 106 ntBASIC0.99□□□□□ -2.25
RPS28P62857 MIR490-201ENST00000384865 128 ntBASIC0.99□□□□□ -2.25
RPS28P62857 MIR1282-201ENST00000408865 101 ntBASIC0.99□□□□□ -2.25
RPS28P62857 RNU2-68P-201ENST00000410878 191 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AL445183.3-201ENST00000414168 502 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AL592310.1-201ENST00000414330 671 ntBASIC0.99□□□□□ -2.25
RPS28P62857 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC0.99□□□□□ -2.25
RPS28P62857 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.99□□□□□ -2.25
RPS28P62857 GAS5-208ENST00000425771 242 ntTSL 3 BASIC0.99□□□□□ -2.25
RPS28P62857 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.99□□□□□ -2.25
RPS28P62857 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.99□□□□□ -2.25
RPS28P62857 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms