Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HERVK_113P62684 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.43□□□□□ -1.7
HERVK_113P62684 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HERVK_113P62684 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HERVK_113P62684 MTCO1P12-201ENST00000414273 1543 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HERVK_113P62684 Y_RNA.259-201ENST00000364619 101 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.43□□□□□ -1.7
HERVK_113P62684 MIR491-201ENST00000384877 84 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 MIR199A2-201ENST00000385289 110 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 AL592114.1-201ENST00000403842 483 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 RNU6-712P-201ENST00000410558 100 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.43□□□□□ -1.7
HERVK_113P62684 KCTD9P3-201ENST00000434597 1169 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 AF228730.2-201ENST00000438784 848 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 BRK1P2-201ENST00000442875 223 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 MTND4P19-201ENST00000446659 478 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.43□□□□□ -1.7
HERVK_113P62684 SNORD19B-201ENST00000459623 84 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 AC106872.2-201ENST00000494303 480 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.43□□□□□ -1.7
HERVK_113P62684 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.43□□□□□ -1.7
HERVK_113P62684 RBBP4P6-201ENST00000508098 202 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 AC074250.1-201ENST00000511117 192 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.43□□□□□ -1.7
HERVK_113P62684 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.43□□□□□ -1.7
HERVK_113P62684 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.43□□□□□ -1.7
HERVK_113P62684 RNU6-559P-201ENST00000516151 98 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 Y_RNA.682-201ENST00000516457 100 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 AP001804.3-201ENST00000525146 880 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 RANP3-201ENST00000530970 276 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 FRG2DP-202ENST00000566967 323 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.43□□□□□ -1.7
HERVK_113P62684 MIR3200-201ENST00000580767 85 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 MIR3942-201ENST00000585264 109 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.43□□□□□ -1.7
HERVK_113P62684 AP001486.3-201ENST00000615334 372 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 MTND5P3-201ENST00000438536 1800 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.43□□□□□ -1.7
HERVK_113P62684 MTCO1P24-201ENST00000515438 1558 ntBASIC4.43□□□□□ -1.7
HERVK_113P62684 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HERVK_113P62684 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.43□□□□□ -1.7
HERVK_113P62684 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HERVK_113P62684 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERVK_113P62684 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.42□□□□□ -1.7
HERVK_113P62684 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.42□□□□□ -1.7
HERVK_113P62684 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERVK_113P62684 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HERVK_113P62684 RNA5SP51-201ENST00000364750 119 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.42□□□□□ -1.7
HERVK_113P62684 RNU6-946P-201ENST00000383878 107 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 RNU6-701P-201ENST00000384059 107 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 RNU4-46P-201ENST00000410818 138 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 SSXP9-201ENST00000417503 292 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 USP9YP20-201ENST00000419224 558 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.42□□□□□ -1.7
HERVK_113P62684 NDUFA5P4-201ENST00000436704 385 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 HMGB1P37-201ENST00000439613 609 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 RPL21P8-201ENST00000465083 535 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 RPL21P103-201ENST00000479921 488 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 Y_RNA.654-201ENST00000497848 106 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 RN7SKP13-201ENST00000515933 244 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 RN7SKP18-201ENST00000516005 275 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 RNU6-864P-201ENST00000516256 108 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 SNORA74D-201ENST00000516404 141 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 RNA5SP164-201ENST00000516533 110 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.42□□□□□ -1.7
HERVK_113P62684 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.42□□□□□ -1.7
HERVK_113P62684 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.42□□□□□ -1.7
HERVK_113P62684 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.42□□□□□ -1.7
HERVK_113P62684 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.42□□□□□ -1.7
HERVK_113P62684 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.42□□□□□ -1.7
HERVK_113P62684 AC092747.3-201ENST00000603769 301 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 AP001330.4-201ENST00000604350 154 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 IGHV3-29-201ENST00000604817 344 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 AL670379.4-201ENST00000605279 254 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 AL158032.1-201ENST00000605401 106 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 HMGB1P50-201ENST00000605814 607 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 MIR7975-201ENST00000619350 68 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.42□□□□□ -1.7
HERVK_113P62684 AC073346.2-201ENST00000624724 2058 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 TPTE2P4-201ENST00000258589 1605 ntBASIC4.42□□□□□ -1.7
HERVK_113P62684 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.42□□□□□ -1.7
HERVK_113P62684 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.42□□□□□ -1.7
HERVK_113P62684 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERVK_113P62684 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERVK_113P62684 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HERVK_113P62684 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.42□□□□□ -1.7
HERVK_113P62684 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113P62684 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.41□□□□□ -1.7
HERVK_113P62684 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HERVK_113P62684 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.41□□□□□ -1.7
HERVK_113P62684 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HERVK_113P62684 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HERVK_113P62684 Y_RNA.301-201ENST00000364990 103 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 SMIM11P1-201ENST00000369586 178 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 RNU6-550P-201ENST00000391057 101 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AL359634.1-202ENST00000404721 284 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 RPS7P15-201ENST00000415804 584 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 BTF3L4P3-201ENST00000418879 476 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms