Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD4P46934 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD4P46934 FABP5P5-201ENST00000515537 406 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD4P46934 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.99□□□□□ -1.93
NEDD4P46934 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.99□□□□□ -1.93
NEDD4P46934 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD4P46934 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
NEDD4P46934 MED28P6-201ENST00000558776 231 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.99□□□□□ -1.93
NEDD4P46934 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD4P46934 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
NEDD4P46934 MIR5697-201ENST00000578045 78 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 COX6CP3-201ENST00000580869 223 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 BDH2P1-201ENST00000602288 736 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 AC011468.4-201ENST00000603942 409 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.99□□□□□ -1.93
NEDD4P46934 AC012150.2-201ENST00000621300 544 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 Z69908.1-201ENST00000622603 247 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 AC019226.1-201ENST00000625666 515 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.99□□□□□ -1.93
NEDD4P46934 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NEDD4P46934 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.99□□□□□ -1.93
NEDD4P46934 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.99□□□□□ -1.93
NEDD4P46934 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
NEDD4P46934 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.99□□□□□ -1.93
NEDD4P46934 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
NEDD4P46934 RNU5E-8P-201ENST00000363502 116 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
NEDD4P46934 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NEDD4P46934 DEFB109C-201ENST00000382575 264 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 DEFB109B-201ENST00000382656 264 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 RPS20P2-201ENST00000402520 389 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 Y_RNA.608-201ENST00000410647 95 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AC078974.1-201ENST00000411597 223 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AC009963.1-201ENST00000417265 157 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 SEPT2P1-201ENST00000419651 180 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 PPP1R11P2-201ENST00000423543 382 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 RPL27AP8-201ENST00000424277 446 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 USP9YP36-201ENST00000424581 829 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.98□□□□□ -1.93
NEDD4P46934 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 USP9YP12-201ENST00000450481 570 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AL590365.1-201ENST00000450788 243 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AL590639.1-201ENST00000456484 337 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 HMGN2P16-201ENST00000456802 261 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.98□□□□□ -1.93
NEDD4P46934 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
NEDD4P46934 AC022878.1-201ENST00000530684 149 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AP000907.2-201ENST00000530827 353 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AC125611.2-201ENST00000551907 647 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 OR4T1P-201ENST00000554933 911 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AL391156.1-201ENST00000554965 554 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.98□□□□□ -1.93
NEDD4P46934 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.98□□□□□ -1.93
NEDD4P46934 AC010620.2-201ENST00000600135 313 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AL158063.1-201ENST00000615349 536 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AL603758.1-201ENST00000618654 241 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
NEDD4P46934 AC009878.1-201ENST00000621819 340 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 AC243829.7-201ENST00000633081 225 ntBASIC2.98□□□□□ -1.93
NEDD4P46934 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NEDD4P46934 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.98□□□□□ -1.93
NEDD4P46934 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NEDD4P46934 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
NEDD4P46934 U3.4-201ENST00000363352 213 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.97□□□□□ -1.93
NEDD4P46934 RNY3P10-201ENST00000384764 102 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 UBE2V1P2-201ENST00000397758 440 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 MIR887-201ENST00000401258 79 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 Y_RNA.598-201ENST00000410480 95 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 RPL21P32-201ENST00000419877 477 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AL353777.1-201ENST00000425552 326 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 NEK4P1-201ENST00000433383 879 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AL049734.2-201ENST00000441066 616 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 TPT1P14-201ENST00000448018 505 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 RNU7-59P-201ENST00000459101 61 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AC135721.1-201ENST00000497954 479 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 RN7SKP24-201ENST00000515888 284 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 RNU1-61P-201ENST00000516107 151 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 RNU6-798P-201ENST00000516912 103 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.97□□□□□ -1.93
NEDD4P46934 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.97□□□□□ -1.93
NEDD4P46934 AC027807.1-201ENST00000559921 996 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.97□□□□□ -1.93
NEDD4P46934 MIR3921-201ENST00000577308 85 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.97□□□□□ -1.93
NEDD4P46934 AP001029.3-201ENST00000588063 596 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AC078899.3-201ENST00000599065 212 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 U73023.1-201ENST00000603134 700 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AC007038.2-201ENST00000608095 740 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AP002826.1-201ENST00000608835 315 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 BX664608.1-201ENST00000610519 487 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AC138749.5-201ENST00000611461 208 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.97□□□□□ -1.93
NEDD4P46934 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
NEDD4P46934 AC116165.2-201ENST00000616705 206 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AC108479.2-201ENST00000617314 601 ntBASIC2.97□□□□□ -1.93
NEDD4P46934 AC009159.1-201ENST00000618386 642 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms