Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU6-1220P-201ENST00000517126 108 ntBASIC2.84□□□□□ -1.95
SHC1P29353 OR4P1P-201ENST00000530808 1136 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AL356432.3-201ENST00000568952 465 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AC068135.2-201ENST00000569293 1028 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.84□□□□□ -1.95
SHC1P29353 AC060771.1-201ENST00000582031 164 ntBASIC2.84□□□□□ -1.95
SHC1P29353 MIR98-201ENST00000606724 119 ntBASIC2.84□□□□□ -1.95
SHC1P29353 PLCE1P1-201ENST00000622094 305 ntBASIC2.84□□□□□ -1.95
SHC1P29353 AC018692.3-201ENST00000623929 123 ntBASIC2.84□□□□□ -1.95
SHC1P29353 CR848007.1-201ENST00000442354 1699 ntBASIC2.84□□□□□ -1.95
SHC1P29353 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.84□□□□□ -1.96
SHC1P29353 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SHC1P29353 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHC1P29353 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SHC1P29353 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHC1P29353 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHC1P29353 AC118273.1-201ENST00000525324 3006 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.83□□□□□ -1.96
SHC1P29353 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.83□□□□□ -1.96
SHC1P29353 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHC1P29353 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.83□□□□□ -1.96
SHC1P29353 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.83□□□□□ -1.96
SHC1P29353 RNU6-97P-201ENST00000363387 104 ntBASIC2.83□□□□□ -1.96
SHC1P29353 SNORA38.1-201ENST00000364172 131 ntBASIC2.83□□□□□ -1.96
SHC1P29353 Y_RNA.453-201ENST00000384223 109 ntBASIC2.83□□□□□ -1.96
SHC1P29353 MIR591-201ENST00000385290 95 ntBASIC2.83□□□□□ -1.96
SHC1P29353 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SHC1P29353 SNORA48.8-201ENST00000391324 134 ntBASIC2.83□□□□□ -1.96
SHC1P29353 MRPL42P2-201ENST00000403169 426 ntBASIC2.83□□□□□ -1.96
SHC1P29353 MIR1277-201ENST00000408536 78 ntBASIC2.83□□□□□ -1.96
SHC1P29353 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.83□□□□□ -1.96
SHC1P29353 RPL30P16-201ENST00000419341 429 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AL353193.1-201ENST00000421444 268 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.83□□□□□ -1.96
SHC1P29353 AC233728.2-201ENST00000425348 757 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC133104.1-201ENST00000429100 218 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.83□□□□□ -1.96
SHC1P29353 AC000111.3-201ENST00000433478 193 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC244505.4-201ENST00000434905 287 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC002486.1-201ENST00000435098 391 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.83□□□□□ -1.96
SHC1P29353 AC108734.1-201ENST00000439549 399 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.83□□□□□ -1.96
SHC1P29353 SSXP5-201ENST00000443473 287 ntBASIC2.83□□□□□ -1.96
SHC1P29353 WASF1P1-201ENST00000447560 1131 ntBASIC2.83□□□□□ -1.96
SHC1P29353 MTND1P12-201ENST00000455231 147 ntBASIC2.83□□□□□ -1.96
SHC1P29353 RPS20P24-201ENST00000457473 361 ntBASIC2.83□□□□□ -1.96
SHC1P29353 snoU13.8-201ENST00000458890 104 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC021382.1-201ENST00000483523 359 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC007182.2-201ENST00000489251 402 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.83□□□□□ -1.96
SHC1P29353 COX7A2P2-201ENST00000505291 250 ntBASIC2.83□□□□□ -1.96
SHC1P29353 RNA5SP468-201ENST00000516782 93 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AP000907.2-201ENST00000530827 353 ntBASIC2.83□□□□□ -1.96
SHC1P29353 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.83□□□□□ -1.96
SHC1P29353 HMGB1P33-201ENST00000563485 527 ntBASIC2.83□□□□□ -1.96
SHC1P29353 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.83□□□□□ -1.96
SHC1P29353 MIR5004-201ENST00000579078 107 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.83□□□□□ -1.96
SHC1P29353 MIR548S-201ENST00000581352 82 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.83□□□□□ -1.96
SHC1P29353 MIR5195-201ENST00000583555 115 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.83□□□□□ -1.96
SHC1P29353 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.83□□□□□ -1.96
SHC1P29353 AC012493.2-201ENST00000595083 291 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC017083.3-201ENST00000609955 700 ntBASIC2.83□□□□□ -1.96
SHC1P29353 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.83□□□□□ -1.96
SHC1P29353 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SHC1P29353 AL356585.4-201ENST00000623078 1229 ntBASIC2.83□□□□□ -1.96
SHC1P29353 AC040168.1-201ENST00000623594 991 ntBASIC2.83□□□□□ -1.96
SHC1P29353 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.83□□□□□ -1.96
SHC1P29353 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SHC1P29353 AC002546.1-201ENST00000588041 2504 ntBASIC2.83□□□□□ -1.96
SHC1P29353 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHC1P29353 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SHC1P29353 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHC1P29353 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SHC1P29353 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SHC1P29353 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.82□□□□□ -1.96
SHC1P29353 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHC1P29353 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHC1P29353 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHC1P29353 MTND5P7-201ENST00000413558 1798 ntBASIC2.82□□□□□ -1.96
SHC1P29353 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.82□□□□□ -1.96
SHC1P29353 RNU6-50P-201ENST00000362356 103 ntBASIC2.82□□□□□ -1.96
SHC1P29353 RNY4P16-201ENST00000364768 94 ntBASIC2.82□□□□□ -1.96
SHC1P29353 RNU6-169P-201ENST00000365336 107 ntBASIC2.82□□□□□ -1.96
SHC1P29353 RNU6-359P-201ENST00000365466 108 ntBASIC2.82□□□□□ -1.96
SHC1P29353 DEFB109C-201ENST00000382575 264 ntBASIC2.82□□□□□ -1.96
SHC1P29353 DEFB109B-201ENST00000382656 264 ntBASIC2.82□□□□□ -1.96
SHC1P29353 Y_RNA.402-201ENST00000383972 102 ntBASIC2.82□□□□□ -1.96
SHC1P29353 RNU6-483P-201ENST00000384088 108 ntBASIC2.82□□□□□ -1.96
SHC1P29353 SNORA7.4-201ENST00000384249 137 ntBASIC2.82□□□□□ -1.96
SHC1P29353 RNU6-114P-201ENST00000384704 105 ntBASIC2.82□□□□□ -1.96
SHC1P29353 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SHC1P29353 SNORD67-201ENST00000390833 111 ntBASIC2.82□□□□□ -1.96
SHC1P29353 RNU4-47P-201ENST00000410876 114 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.82□□□□□ -1.96
SHC1P29353 TRIAP1P1-201ENST00000427062 225 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms