Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX1P22670 AC007919.1-201ENST00000429380 217 ntBASIC5.36□□□□□ -1.55
RFX1P22670 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.36□□□□□ -1.55
RFX1P22670 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.36□□□□□ -1.55
RFX1P22670 AL513043.1-201ENST00000439124 535 ntBASIC5.36□□□□□ -1.55
RFX1P22670 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX1P22670 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.36□□□□□ -1.55
RFX1P22670 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX1P22670 RPL9P9-202ENST00000466501 579 ntBASIC5.36□□□□□ -1.55
RFX1P22670 AC133134.1-201ENST00000466800 359 ntBASIC5.36□□□□□ -1.55
RFX1P22670 AC020890.1-201ENST00000491837 504 ntBASIC5.36□□□□□ -1.55
RFX1P22670 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX1P22670 AP006289.1-201ENST00000538089 277 ntBASIC5.36□□□□□ -1.55
RFX1P22670 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX1P22670 MIR3667-201ENST00000581025 74 ntBASIC5.36□□□□□ -1.55
RFX1P22670 MIR4691-201ENST00000583764 85 ntBASIC5.36□□□□□ -1.55
RFX1P22670 RNU6-6P-201ENST00000606623 107 ntBASIC5.36□□□□□ -1.55
RFX1P22670 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX1P22670 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX1P22670 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX1P22670 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFX1P22670 AL731566.1-201ENST00000620490 1937 ntBASIC5.36□□□□□ -1.55
RFX1P22670 MARK2P15-201ENST00000432204 2186 ntBASIC5.36□□□□□ -1.55
RFX1P22670 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.36□□□□□ -1.55
RFX1P22670 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFX1P22670 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX1P22670 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX1P22670 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX1P22670 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX1P22670 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX1P22670 PCAT14-202ENST00000627127 3935 ntBASIC5.35□□□□□ -1.55
RFX1P22670 Y_RNA.126-201ENST00000363382 111 ntBASIC5.35□□□□□ -1.55
RFX1P22670 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX1P22670 RNU6-1156P-201ENST00000410365 100 ntBASIC5.35□□□□□ -1.55
RFX1P22670 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.35□□□□□ -1.55
RFX1P22670 AC108032.1-201ENST00000416706 207 ntBASIC5.35□□□□□ -1.55
RFX1P22670 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX1P22670 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX1P22670 CECR9-201ENST00000453421 199 ntBASIC5.35□□□□□ -1.55
RFX1P22670 AL583843.1-201ENST00000456070 346 ntBASIC5.35□□□□□ -1.55
RFX1P22670 KC877373.1-201ENST00000479066 408 ntBASIC5.35□□□□□ -1.55
RFX1P22670 AC023141.12-201ENST00000512399 199 ntBASIC5.35□□□□□ -1.55
RFX1P22670 RNA5SP249-201ENST00000516127 99 ntBASIC5.35□□□□□ -1.55
RFX1P22670 SNORA40.14-201ENST00000516543 86 ntBASIC5.35□□□□□ -1.55
RFX1P22670 RNA5SP43-201ENST00000516559 110 ntBASIC5.35□□□□□ -1.55
RFX1P22670 AC009812.2-201ENST00000517657 457 ntBASIC5.35□□□□□ -1.55
RFX1P22670 CBX3P8-201ENST00000532412 525 ntBASIC5.35□□□□□ -1.55
RFX1P22670 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.35□□□□□ -1.55
RFX1P22670 MIR3976-201ENST00000606807 139 ntBASIC5.35□□□□□ -1.55
RFX1P22670 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.35□□□□□ -1.55
RFX1P22670 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
RFX1P22670 AC118273.1-201ENST00000525324 3006 ntBASIC5.35□□□□□ -1.55
RFX1P22670 AL672167.1-204ENST00000641875 3017 ntBASIC5.35□□□□□ -1.55
RFX1P22670 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX1P22670 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX1P22670 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX1P22670 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFX1P22670 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.35□□□□□ -1.55
RFX1P22670 NCAPGP1-201ENST00000505112 1814 ntBASIC5.34□□□□□ -1.55
RFX1P22670 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX1P22670 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RFX1P22670 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.34□□□□□ -1.55
RFX1P22670 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX1P22670 Y_RNA.188-201ENST00000363952 111 ntBASIC5.34□□□□□ -1.55
RFX1P22670 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX1P22670 Y_RNA.556-201ENST00000384677 113 ntBASIC5.34□□□□□ -1.55
RFX1P22670 MIR607-201ENST00000385241 96 ntBASIC5.34□□□□□ -1.55
RFX1P22670 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RFX1P22670 AC092047.1-201ENST00000424997 240 ntBASIC5.34□□□□□ -1.55
RFX1P22670 RPL21P66-201ENST00000426566 466 ntBASIC5.34□□□□□ -1.55
RFX1P22670 TOMM20P4-201ENST00000427861 435 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AL353997.1-201ENST00000432936 108 ntBASIC5.34□□□□□ -1.55
RFX1P22670 Z82210.1-201ENST00000440037 231 ntBASIC5.34□□□□□ -1.55
RFX1P22670 PIGFP3-201ENST00000441918 722 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.34□□□□□ -1.55
RFX1P22670 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.34□□□□□ -1.55
RFX1P22670 AC013470.1-201ENST00000453438 462 ntBASIC5.34□□□□□ -1.55
RFX1P22670 U8.21-201ENST00000459536 136 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AP000873.1-201ENST00000463987 400 ntBASIC5.34□□□□□ -1.55
RFX1P22670 RPS23P7-201ENST00000466210 444 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AC010655.3-201ENST00000478818 450 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AC104164.2-201ENST00000496953 495 ntBASIC5.34□□□□□ -1.55
RFX1P22670 MTND4LP22-201ENST00000508209 276 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AC005921.1-201ENST00000510589 286 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AC007016.1-201ENST00000512110 244 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AC005868.1-201ENST00000536421 331 ntBASIC5.34□□□□□ -1.55
RFX1P22670 FKBP1BP1-201ENST00000553366 325 ntBASIC5.34□□□□□ -1.55
RFX1P22670 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX1P22670 AC091042.1-201ENST00000579213 173 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AC209154.1-201ENST00000582156 337 ntBASIC5.34□□□□□ -1.55
RFX1P22670 MIR4737-201ENST00000583979 81 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AL355297.3-201ENST00000604082 446 ntBASIC5.34□□□□□ -1.55
RFX1P22670 AC136601.2-201ENST00000604356 474 ntBASIC5.34□□□□□ -1.55
RFX1P22670 Z98751.3-201ENST00000604447 521 ntBASIC5.34□□□□□ -1.55
RFX1P22670 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.34□□□□□ -1.55
RFX1P22670 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.34□□□□□ -1.55
RFX1P22670 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFX1P22670 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.34□□□□□ -1.56
RFX1P22670 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
RFX1P22670 AC008669.1-201ENST00000565823 2178 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms