Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MTCO3P12-201ENST00000416718 547 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGA1P17096 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGA1P17096 SNORD97-201ENST00000459187 142 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 snoU13.18-201ENST00000459483 104 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGA1P17096 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGA1P17096 TPT1P8-201ENST00000510120 555 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGA1P17096 CBX3P7-201ENST00000532876 502 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 AC084033.1-201ENST00000550830 633 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 CYCSP2-201ENST00000558168 301 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 LINC00933-203ENST00000559812 219 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 AC109446.2-201ENST00000567872 497 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGA1P17096 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGA1P17096 AC106900.2-201ENST00000604994 317 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 AC135507.1-201ENST00000607214 561 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 AC055764.2-201ENST00000610089 670 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 AC079395.3-201ENST00000615161 484 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 MIR6788-201ENST00000618842 66 ntBASIC0.99□□□□□ -2.25
HMGA1P17096 AC008568.2-201ENST00000623862 2313 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 ZNF702P-202ENST00000434269 1966 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.98□□□□□ -2.25
HMGA1P17096 SNORA51.12-201ENST00000384448 134 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
HMGA1P17096 U3.29-201ENST00000391296 212 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 AL589655.1-201ENST00000405398 482 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 RPL7L1P10-201ENST00000427790 463 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGA1P17096 USP12PX-201ENST00000432383 1057 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 AL645638.1-201ENST00000440519 361 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGA1P17096 snoU109.1-201ENST00000459339 135 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 LARP7P4-201ENST00000481075 878 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 RNA5SP220-201ENST00000516298 104 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.98□□□□□ -2.25
HMGA1P17096 DUXAP5-201ENST00000529668 529 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 OR5AL2P-201ENST00000532185 920 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.98□□□□□ -2.25
HMGA1P17096 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGA1P17096 MIR4529-201ENST00000578110 78 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.98□□□□□ -2.25
HMGA1P17096 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.98□□□□□ -2.25
HMGA1P17096 AL078603.1-201ENST00000603824 313 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 AP001330.4-201ENST00000604350 154 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 AC103710.4-201ENST00000609301 899 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.98□□□□□ -2.25
HMGA1P17096 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HMGA1P17096 AL161722.3-201ENST00000605789 2983 ntBASIC0.98□□□□□ -2.25
HMGA1P17096 AC111188.2-201ENST00000529697 1387 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HMGA1P17096 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.97□□□□□ -2.25
HMGA1P17096 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.97□□□□□ -2.25
HMGA1P17096 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HMGA1P17096 RNU6-1-201ENST00000383898 107 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RNU6-42P-201ENST00000384165 107 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RNU6-36P-201ENST00000384172 107 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RNU6-4P-201ENST00000384205 107 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RNU6-5P-201ENST00000384238 107 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RNU6-3P-201ENST00000384314 107 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RNU6-2-201ENST00000384627 107 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RNU6-9-201ENST00000384776 107 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RNU6-33P-201ENST00000384793 107 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 SFR1P1-201ENST00000403720 688 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGA1P17096 AC092648.1-201ENST00000425870 423 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RPL30P4-201ENST00000429309 333 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RPL23AP6-201ENST00000446637 472 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 MTND2P8-201ENST00000450555 1025 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 AC096751.1-202ENST00000502691 1067 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 SNORA31.25-201ENST00000517242 134 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.97□□□□□ -2.25
HMGA1P17096 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
HMGA1P17096 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.97□□□□□ -2.25
HMGA1P17096 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGA1P17096 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.97□□□□□ -2.25
HMGA1P17096 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 RNU6-6P-201ENST00000606623 107 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 AC022709.1-201ENST00000615967 87 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 AC106730.3-201ENST00000624568 641 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.97□□□□□ -2.25
HMGA1P17096 AC087359.1-201ENST00000508335 1740 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.97□□□□□ -2.25
HMGA1P17096 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
HMGA1P17096 MIR767-201ENST00000390228 109 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 RNU2-21P-201ENST00000410368 188 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGA1P17096 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGA1P17096 AL009174.1-201ENST00000426577 416 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.96□□□□□ -2.26
HMGA1P17096 AC245517.4-201ENST00000448601 281 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 RPS15AP27-201ENST00000449183 343 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 AC096992.1-201ENST00000459808 709 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.96□□□□□ -2.26
HMGA1P17096 PCNAP1-201ENST00000505363 709 ntBASIC0.96□□□□□ -2.26
HMGA1P17096 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGA1P17096 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.96□□□□□ -2.26
HMGA1P17096 AC016957.1-201ENST00000534895 309 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms