Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PF4V1P10720 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
PF4V1P10720 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
PF4V1P10720 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PF4V1P10720 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.69□□□□□ -1.82
PF4V1P10720 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.69□□□□□ -1.82
PF4V1P10720 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PF4V1P10720 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PF4V1P10720 RNU6-254P-201ENST00000363377 107 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 RNU6-867P-201ENST00000364956 107 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 U1.1-201ENST00000384101 164 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 RN7SKP32-201ENST00000410167 303 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 RNA5SP31-201ENST00000411144 127 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 AC022028.1-201ENST00000412054 408 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 EIF4HP2-201ENST00000424380 563 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.69□□□□□ -1.82
PF4V1P10720 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.69□□□□□ -1.82
PF4V1P10720 AC091390.1-201ENST00000433904 331 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.69□□□□□ -1.82
PF4V1P10720 CYCSP34-201ENST00000458172 304 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 RPS23P7-201ENST00000466210 444 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PF4V1P10720 RNU4-49P-201ENST00000516080 140 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.69□□□□□ -1.82
PF4V1P10720 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.69□□□□□ -1.82
PF4V1P10720 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.69□□□□□ -1.82
PF4V1P10720 AC069061.3-201ENST00000582254 823 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 AC021646.1-201ENST00000605469 484 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 AL357078.3-201ENST00000607528 618 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 MIR6134-201ENST00000617606 109 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 SCARNA4-202ENST00000625402 129 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PF4V1P10720 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PF4V1P10720 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PF4V1P10720 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PF4V1P10720 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PF4V1P10720 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.69□□□□□ -1.82
PF4V1P10720 AL731532.2-201ENST00000623542 1953 ntBASIC3.69□□□□□ -1.82
PF4V1P10720 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.69□□□□□ -1.82
PF4V1P10720 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PF4V1P10720 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PF4V1P10720 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.69□□□□□ -1.82
PF4V1P10720 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
PF4V1P10720 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PF4V1P10720 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PF4V1P10720 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PF4V1P10720 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PF4V1P10720 RNU6-831P-201ENST00000384548 107 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AL583835.1-201ENST00000399570 407 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 MIR450B-201ENST00000401182 78 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.68□□□□□ -1.82
PF4V1P10720 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PF4V1P10720 MTND3P8-201ENST00000412909 339 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.68□□□□□ -1.82
PF4V1P10720 AC245291.1-201ENST00000419501 328 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 PGBD4P6-201ENST00000421501 610 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 RPL7P28-201ENST00000437739 740 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.68□□□□□ -1.82
PF4V1P10720 BTF3P6-201ENST00000448054 499 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 HMGN2P10-201ENST00000448085 265 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AL451050.1-201ENST00000450126 415 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.68□□□□□ -1.82
PF4V1P10720 AC025164.1-201ENST00000496249 478 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 SCARNA22-201ENST00000503991 125 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.68□□□□□ -1.82
PF4V1P10720 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.68□□□□□ -1.82
PF4V1P10720 AC015795.1-201ENST00000513669 327 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 RNU6-864P-201ENST00000516256 108 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 IGKV2-23-201ENST00000518729 323 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 RNU6-323P-201ENST00000521915 107 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PF4V1P10720 PARP1P2-201ENST00000556806 195 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.68□□□□□ -1.82
PF4V1P10720 RN7SL690P-201ENST00000582087 240 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AL451007.1-201ENST00000595491 289 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.68□□□□□ -1.82
PF4V1P10720 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.68□□□□□ -1.82
PF4V1P10720 AC104662.1-201ENST00000604448 511 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 APOOP1-201ENST00000604695 592 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AC110741.2-201ENST00000605278 268 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 AL355073.2-201ENST00000612106 557 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 ATP5A1P2-202ENST00000616464 443 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 MIR7703-201ENST00000620784 77 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 Z69720.2-201ENST00000624755 279 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PF4V1P10720 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PF4V1P10720 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PF4V1P10720 MAPK10-322ENST00000641485 4530 ntBASIC3.68□□□□□ -1.82
PF4V1P10720 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PF4V1P10720 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
PF4V1P10720 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PF4V1P10720 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PF4V1P10720 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PF4V1P10720 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PF4V1P10720 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PF4V1P10720 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PF4V1P10720 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
PF4V1P10720 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.67□□□□□ -1.82
PF4V1P10720 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PF4V1P10720 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms