Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SEPT7P9-203ENST00000604116 343 ntBASIC3.34□□□□□ -1.87
RB1P06400 HSPE1P7-201ENST00000604681 321 ntBASIC3.34□□□□□ -1.87
RB1P06400 AC107294.1-201ENST00000609524 467 ntBASIC3.34□□□□□ -1.87
RB1P06400 AC103710.2-201ENST00000609912 942 ntBASIC3.34□□□□□ -1.87
RB1P06400 AC091304.9-201ENST00000612091 226 ntBASIC3.34□□□□□ -1.87
RB1P06400 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.34□□□□□ -1.87
RB1P06400 AP001506.1-201ENST00000615444 211 ntBASIC3.34□□□□□ -1.87
RB1P06400 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.34□□□□□ -1.87
RB1P06400 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.34□□□□□ -1.87
RB1P06400 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.34□□□□□ -1.88
RB1P06400 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RB1P06400 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.33□□□□□ -1.88
RB1P06400 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RB1P06400 RNU5E-1-201ENST00000362477 120 ntBASIC3.33□□□□□ -1.88
RB1P06400 U3.11-201ENST00000364476 212 ntBASIC3.33□□□□□ -1.88
RB1P06400 RNU6-297P-201ENST00000384636 107 ntBASIC3.33□□□□□ -1.88
RB1P06400 MIR325-201ENST00000385260 98 ntBASIC3.33□□□□□ -1.88
RB1P06400 RNU2-33P-201ENST00000410344 192 ntBASIC3.33□□□□□ -1.88
RB1P06400 RNU2-8P-201ENST00000410727 190 ntBASIC3.33□□□□□ -1.88
RB1P06400 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.33□□□□□ -1.88
RB1P06400 AL139132.1-201ENST00000431587 344 ntBASIC3.33□□□□□ -1.88
RB1P06400 AL512844.2-201ENST00000433990 593 ntBASIC3.33□□□□□ -1.88
RB1P06400 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.33□□□□□ -1.88
RB1P06400 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.33□□□□□ -1.88
RB1P06400 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.33□□□□□ -1.88
RB1P06400 AC006539.3-201ENST00000454258 129 ntBASIC3.33□□□□□ -1.88
RB1P06400 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.33□□□□□ -1.88
RB1P06400 RNU6-956P-201ENST00000458868 103 ntBASIC3.33□□□□□ -1.88
RB1P06400 AL135752.1-201ENST00000479477 471 ntBASIC3.33□□□□□ -1.88
RB1P06400 LARP1BP2-201ENST00000486594 519 ntBASIC3.33□□□□□ -1.88
RB1P06400 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.33□□□□□ -1.88
RB1P06400 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.33□□□□□ -1.88
RB1P06400 AC117522.2-201ENST00000510049 657 ntBASIC3.33□□□□□ -1.88
RB1P06400 AC010486.1-201ENST00000511793 424 ntBASIC3.33□□□□□ -1.88
RB1P06400 AC091826.1-201ENST00000514065 313 ntBASIC3.33□□□□□ -1.88
RB1P06400 RNU6-927P-201ENST00000516199 100 ntBASIC3.33□□□□□ -1.88
RB1P06400 RN7SKP272-201ENST00000516988 232 ntBASIC3.33□□□□□ -1.88
RB1P06400 RNU2-46P-201ENST00000517038 113 ntBASIC3.33□□□□□ -1.88
RB1P06400 RN7SKP258-201ENST00000517151 304 ntBASIC3.33□□□□□ -1.88
RB1P06400 AC011979.2-201ENST00000527568 352 ntBASIC3.33□□□□□ -1.88
RB1P06400 AC128657.1-201ENST00000549459 145 ntBASIC3.33□□□□□ -1.88
RB1P06400 ARL2BPP2-201ENST00000550907 489 ntBASIC3.33□□□□□ -1.88
RB1P06400 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.33□□□□□ -1.88
RB1P06400 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.33□□□□□ -1.88
RB1P06400 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.33□□□□□ -1.88
RB1P06400 TRAV28-201ENST00000557548 323 ntBASIC3.33□□□□□ -1.88
RB1P06400 MTCO3P24-201ENST00000572729 782 ntBASIC3.33□□□□□ -1.88
RB1P06400 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.33□□□□□ -1.88
RB1P06400 AC087752.4-201ENST00000605911 462 ntBASIC3.33□□□□□ -1.88
RB1P06400 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.33□□□□□ -1.88
RB1P06400 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.33□□□□□ -1.88
RB1P06400 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RB1P06400 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.33□□□□□ -1.88
RB1P06400 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RB1P06400 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RB1P06400 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.33□□□□□ -1.88
RB1P06400 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.32□□□□□ -1.88
RB1P06400 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RB1P06400 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.32□□□□□ -1.88
RB1P06400 MIR22-201ENST00000362190 85 ntBASIC3.32□□□□□ -1.88
RB1P06400 U8.3-201ENST00000363321 132 ntBASIC3.32□□□□□ -1.88
RB1P06400 RPL23AP32-201ENST00000395315 459 ntBASIC3.32□□□□□ -1.88
RB1P06400 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RB1P06400 HSPE1P1-201ENST00000421494 318 ntBASIC3.32□□□□□ -1.88
RB1P06400 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.32□□□□□ -1.88
RB1P06400 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.32□□□□□ -1.88
RB1P06400 FCF1P1-201ENST00000432690 571 ntBASIC3.32□□□□□ -1.88
RB1P06400 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
RB1P06400 Z82210.1-201ENST00000440037 231 ntBASIC3.32□□□□□ -1.88
RB1P06400 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.32□□□□□ -1.88
RB1P06400 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.32□□□□□ -1.88
RB1P06400 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.32□□□□□ -1.88
RB1P06400 SNORD97-201ENST00000459187 142 ntBASIC3.32□□□□□ -1.88
RB1P06400 RAP1BP2-201ENST00000478270 544 ntBASIC3.32□□□□□ -1.88
RB1P06400 AC092185.1-201ENST00000491371 97 ntBASIC3.32□□□□□ -1.88
RB1P06400 AC083906.5-201ENST00000503722 328 ntBASIC3.32□□□□□ -1.88
RB1P06400 AC105313.1-201ENST00000509121 353 ntBASIC3.32□□□□□ -1.88
RB1P06400 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.32□□□□□ -1.88
RB1P06400 SNORA31.1-201ENST00000515993 133 ntBASIC3.32□□□□□ -1.88
RB1P06400 SNORA31.5-201ENST00000516190 133 ntBASIC3.32□□□□□ -1.88
RB1P06400 RNA5SP291-201ENST00000517222 105 ntBASIC3.32□□□□□ -1.88
RB1P06400 AP000873.5-201ENST00000533906 236 ntBASIC3.32□□□□□ -1.88
RB1P06400 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.32□□□□□ -1.88
RB1P06400 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.32□□□□□ -1.88
RB1P06400 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.32□□□□□ -1.88
RB1P06400 AC005951.1-201ENST00000576706 485 ntBASIC3.32□□□□□ -1.88
RB1P06400 MIR3682-201ENST00000581338 84 ntBASIC3.32□□□□□ -1.88
RB1P06400 MIR3609-201ENST00000582661 80 ntBASIC3.32□□□□□ -1.88
RB1P06400 NBR2-204ENST00000587322 63 ntBASIC3.32□□□□□ -1.88
RB1P06400 DPPA3P3-201ENST00000603842 430 ntBASIC3.32□□□□□ -1.88
RB1P06400 AC100793.4-201ENST00000613683 429 ntBASIC3.32□□□□□ -1.88
RB1P06400 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.32□□□□□ -1.88
RB1P06400 TEX21P-201ENST00000447107 1476 ntBASIC3.32□□□□□ -1.88
RB1P06400 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.32□□□□□ -1.88
RB1P06400 AL049641.1-201ENST00000441055 1948 ntBASIC3.32□□□□□ -1.88
RB1P06400 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RB1P06400 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RB1P06400 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RB1P06400 Y_RNA.553-201ENST00000384670 102 ntBASIC3.31□□□□□ -1.88
RB1P06400 AL445529.1-201ENST00000398713 389 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms