Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
RTN3O95197 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RTN3O95197 AC245166.1-201ENST00000521012 253 ntBASIC3.45□□□□□ -1.86
RTN3O95197 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.45□□□□□ -1.86
RTN3O95197 RPL21P12-201ENST00000559810 515 ntBASIC3.45□□□□□ -1.86
RTN3O95197 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.45□□□□□ -1.86
RTN3O95197 AC006504.3-201ENST00000586818 523 ntBASIC3.45□□□□□ -1.86
RTN3O95197 AC136601.2-201ENST00000604356 474 ntBASIC3.45□□□□□ -1.86
RTN3O95197 AC097065.2-201ENST00000608159 533 ntBASIC3.45□□□□□ -1.86
RTN3O95197 uc_338.1-201ENST00000612113 180 ntBASIC3.45□□□□□ -1.86
RTN3O95197 AP003122.6-201ENST00000623831 495 ntBASIC3.45□□□□□ -1.86
RTN3O95197 AC110994.2-201ENST00000635481 492 ntBASIC3.45□□□□□ -1.86
RTN3O95197 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RTN3O95197 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.45□□□□□ -1.86
RTN3O95197 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RTN3O95197 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RTN3O95197 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.44□□□□□ -1.86
RTN3O95197 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.44□□□□□ -1.86
RTN3O95197 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
RTN3O95197 RNY1P12-201ENST00000364251 105 ntBASIC3.44□□□□□ -1.86
RTN3O95197 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RTN3O95197 RNU6-198P-201ENST00000384258 104 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AL357075.1-201ENST00000404107 726 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.44□□□□□ -1.86
RTN3O95197 AC127391.1-201ENST00000411737 98 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.44□□□□□ -1.86
RTN3O95197 HSPE1P1-201ENST00000421494 318 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC104651.1-201ENST00000427559 735 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC010153.1-201ENST00000432862 727 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC009961.2-201ENST00000435771 251 ntBASIC3.44□□□□□ -1.86
RTN3O95197 MTCO2P16-201ENST00000436962 677 ntBASIC3.44□□□□□ -1.86
RTN3O95197 HMGB3P12-201ENST00000438745 556 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AP000936.2-201ENST00000447151 681 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AL136380.1-201ENST00000447970 162 ntBASIC3.44□□□□□ -1.86
RTN3O95197 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.44□□□□□ -1.86
RTN3O95197 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.44□□□□□ -1.86
RTN3O95197 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.44□□□□□ -1.86
RTN3O95197 GAPDHP17-201ENST00000449858 1001 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC092798.1-201ENST00000458542 409 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC109925.1-201ENST00000478069 331 ntBASIC3.44□□□□□ -1.86
RTN3O95197 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.44□□□□□ -1.86
RTN3O95197 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.44□□□□□ -1.86
RTN3O95197 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.44□□□□□ -1.86
RTN3O95197 RN7SKP57-201ENST00000517248 293 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.44□□□□□ -1.86
RTN3O95197 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.44□□□□□ -1.86
RTN3O95197 MIR5004-201ENST00000579078 107 ntBASIC3.44□□□□□ -1.86
RTN3O95197 NBR2-204ENST00000587322 63 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.44□□□□□ -1.86
RTN3O95197 AC090578.1-201ENST00000604955 591 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC007619.2-201ENST00000605743 379 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC107294.1-201ENST00000609524 467 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AL133173.2-201ENST00000614270 90 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AL589994.2-201ENST00000621124 579 ntBASIC3.44□□□□□ -1.86
RTN3O95197 AC010680.1-201ENST00000590024 3590 ntBASIC3.44□□□□□ -1.86
RTN3O95197 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.44□□□□□ -1.86
RTN3O95197 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.44□□□□□ -1.86
RTN3O95197 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RTN3O95197 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
RTN3O95197 GABRG2-229ENST00000641017 3628 ntBASIC3.43□□□□□ -1.86
RTN3O95197 MTND5P29-201ENST00000458676 1807 ntBASIC3.43□□□□□ -1.86
RTN3O95197 Y_RNA.201-201ENST00000364052 96 ntBASIC3.43□□□□□ -1.86
RTN3O95197 RNU6-960P-201ENST00000364056 120 ntBASIC3.43□□□□□ -1.86
RTN3O95197 Y_RNA.553-201ENST00000384670 102 ntBASIC3.43□□□□□ -1.86
RTN3O95197 RNU6-817P-201ENST00000391083 104 ntBASIC3.43□□□□□ -1.86
RTN3O95197 RPS3AP36-201ENST00000398190 775 ntBASIC3.43□□□□□ -1.86
RTN3O95197 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AC063979.1-201ENST00000415539 377 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AL353678.1-201ENST00000422735 741 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN3O95197 RPL7P46-201ENST00000425129 740 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN3O95197 AC244505.4-201ENST00000434905 287 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN3O95197 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN3O95197 SSXP5-201ENST00000443473 287 ntBASIC3.43□□□□□ -1.86
RTN3O95197 USP9YP29-201ENST00000445112 563 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.43□□□□□ -1.86
RTN3O95197 AC021205.2-201ENST00000480069 347 ntBASIC3.43□□□□□ -1.86
RTN3O95197 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN3O95197 AC138853.1-201ENST00000503549 823 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.43□□□□□ -1.86
RTN3O95197 AC010424.1-201ENST00000506336 297 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN3O95197 Vault.3-201ENST00000516676 95 ntBASIC3.43□□□□□ -1.86
RTN3O95197 SNORA18.6-201ENST00000516792 115 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN3O95197 AC007536.1-201ENST00000533382 349 ntBASIC3.43□□□□□ -1.86
RTN3O95197 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.43□□□□□ -1.86
RTN3O95197 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.43□□□□□ -1.86
RTN3O95197 AC040904.1-201ENST00000590850 223 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AC098826.3-201ENST00000603823 466 ntBASIC3.43□□□□□ -1.86
RTN3O95197 AP002360.4-201ENST00000606980 481 ntBASIC3.43□□□□□ -1.86
RTN3O95197 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RTN3O95197 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.43□□□□□ -1.86
RTN3O95197 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.43□□□□□ -1.86
RTN3O95197 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RTN3O95197 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RTN3O95197 AC103988.1-201ENST00000566382 2177 ntBASIC3.42□□□□□ -1.86
RTN3O95197 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms