Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST1O76090 RNU6-1092P-201ENST00000516955 87 ntBASIC3.22□□□□□ -1.89
BEST1O76090 RNA5SP337-201ENST00000517007 109 ntBASIC3.22□□□□□ -1.89
BEST1O76090 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
BEST1O76090 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.22□□□□□ -1.89
BEST1O76090 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST1O76090 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST1O76090 AL391261.3-201ENST00000557194 520 ntBASIC3.22□□□□□ -1.89
BEST1O76090 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST1O76090 MIR548AB-201ENST00000584917 84 ntBASIC3.22□□□□□ -1.89
BEST1O76090 AC009977.1-201ENST00000586015 570 ntBASIC3.22□□□□□ -1.89
BEST1O76090 HMGN1P30-201ENST00000589286 268 ntBASIC3.22□□□□□ -1.89
BEST1O76090 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST1O76090 AC025594.3-201ENST00000613068 790 ntBASIC3.22□□□□□ -1.89
BEST1O76090 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.22□□□□□ -1.89
BEST1O76090 AC007998.5-201ENST00000622938 237 ntBASIC3.22□□□□□ -1.89
BEST1O76090 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BEST1O76090 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BEST1O76090 AP003122.5-201ENST00000527668 3766 ntBASIC3.22□□□□□ -1.89
BEST1O76090 AC004972.1-201ENST00000623934 2209 ntBASIC3.21□□□□□ -1.89
BEST1O76090 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.21□□□□□ -1.9
BEST1O76090 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
BEST1O76090 UBE2L2-201ENST00000254302 429 ntBASIC3.21□□□□□ -1.9
BEST1O76090 HSPE1P11-201ENST00000339579 310 ntBASIC3.21□□□□□ -1.9
BEST1O76090 RNU6-960P-201ENST00000364056 120 ntBASIC3.21□□□□□ -1.9
BEST1O76090 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.21□□□□□ -1.9
BEST1O76090 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.21□□□□□ -1.9
BEST1O76090 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
BEST1O76090 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.21□□□□□ -1.9
BEST1O76090 AL589872.1-201ENST00000426602 288 ntBASIC3.21□□□□□ -1.9
BEST1O76090 DPPA2P1-201ENST00000428060 556 ntBASIC3.21□□□□□ -1.9
BEST1O76090 GPM6BP2-201ENST00000432046 144 ntBASIC3.21□□□□□ -1.9
BEST1O76090 HMGB3P12-201ENST00000438745 556 ntBASIC3.21□□□□□ -1.9
BEST1O76090 USP9YP15-201ENST00000442391 422 ntBASIC3.21□□□□□ -1.9
BEST1O76090 GPM6BP1-201ENST00000446387 144 ntBASIC3.21□□□□□ -1.9
BEST1O76090 RNU6-953P-201ENST00000459154 107 ntBASIC3.21□□□□□ -1.9
BEST1O76090 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.21□□□□□ -1.9
BEST1O76090 AC114786.4-201ENST00000508771 728 ntBASIC3.21□□□□□ -1.9
BEST1O76090 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.21□□□□□ -1.9
BEST1O76090 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BEST1O76090 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.9
BEST1O76090 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.21□□□□□ -1.9
BEST1O76090 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.21□□□□□ -1.9
BEST1O76090 AC104763.2-201ENST00000604179 382 ntBASIC3.21□□□□□ -1.9
BEST1O76090 Z94722.1-201ENST00000604328 474 ntBASIC3.21□□□□□ -1.9
BEST1O76090 AC004805.2-201ENST00000605382 482 ntBASIC3.21□□□□□ -1.9
BEST1O76090 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.9
BEST1O76090 AC007318.2-201ENST00000620999 243 ntBASIC3.21□□□□□ -1.9
BEST1O76090 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.21□□□□□ -1.9
BEST1O76090 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
BEST1O76090 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
BEST1O76090 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.21□□□□□ -1.9
BEST1O76090 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
BEST1O76090 GNG5P1-201ENST00000255500 204 ntBASIC3.2□□□□□ -1.9
BEST1O76090 RNU6-884P-201ENST00000363889 107 ntBASIC3.2□□□□□ -1.9
BEST1O76090 RNU4-1-201ENST00000363925 141 ntBASIC3.2□□□□□ -1.9
BEST1O76090 SNORA71.1-201ENST00000364523 117 ntBASIC3.2□□□□□ -1.9
BEST1O76090 RNU6-14P-201ENST00000384630 106 ntBASIC3.2□□□□□ -1.9
BEST1O76090 RNA5SP354-201ENST00000391247 136 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AL021407.1-201ENST00000404531 386 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AL138885.1-201ENST00000405921 675 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST1O76090 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST1O76090 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.2□□□□□ -1.9
BEST1O76090 AL645937.1-202ENST00000421799 937 ntBASIC3.2□□□□□ -1.9
BEST1O76090 RPL31P12-201ENST00000422587 358 ntBASIC3.2□□□□□ -1.9
BEST1O76090 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.2□□□□□ -1.9
BEST1O76090 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.2□□□□□ -1.9
BEST1O76090 RPL35AP12-201ENST00000425362 338 ntBASIC3.2□□□□□ -1.9
BEST1O76090 ISCA1P1-201ENST00000426679 387 ntBASIC3.2□□□□□ -1.9
BEST1O76090 PGBD4P3-201ENST00000440731 581 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST1O76090 CECR9-201ENST00000453421 199 ntBASIC3.2□□□□□ -1.9
BEST1O76090 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST1O76090 snoU109.1-201ENST00000459339 135 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST1O76090 AC117440.1-201ENST00000474107 571 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AC011825.1-201ENST00000484967 388 ntBASIC3.2□□□□□ -1.9
BEST1O76090 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.2□□□□□ -1.9
BEST1O76090 RNU7-51P-201ENST00000516560 62 ntBASIC3.2□□□□□ -1.9
BEST1O76090 RNA5SP471-201ENST00000516971 106 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST1O76090 MTND2P38-201ENST00000522536 667 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AC087373.1-201ENST00000524920 491 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.2□□□□□ -1.9
BEST1O76090 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST1O76090 MIR3682-201ENST00000581338 84 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AC174048.1-201ENST00000603389 144 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AL358072.1-201ENST00000604156 575 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AC007363.1-201ENST00000604736 620 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AL603839.4-201ENST00000624658 1005 ntBASIC3.2□□□□□ -1.9
BEST1O76090 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST1O76090 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST1O76090 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
BEST1O76090 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.2□□□□□ -1.9
BEST1O76090 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BEST1O76090 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BEST1O76090 SNORA44-201ENST00000384584 132 ntBASIC3.19□□□□□ -1.9
BEST1O76090 RNY3P10-201ENST00000384764 102 ntBASIC3.19□□□□□ -1.9
BEST1O76090 RPL23AP32-201ENST00000395315 459 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms