Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MRPL50P4-201ENST00000446432 475 ntBASIC3.29□□□□□ -1.88
LDB3O75112 RPL21P23-201ENST00000446654 460 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB3O75112 HMGN2P16-201ENST00000456802 261 ntBASIC3.29□□□□□ -1.88
LDB3O75112 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB3O75112 U3.44-201ENST00000458938 192 ntBASIC3.29□□□□□ -1.88
LDB3O75112 RN7SL594P-201ENST00000470590 287 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.29□□□□□ -1.88
LDB3O75112 AP002812.1-201ENST00000495378 474 ntBASIC3.29□□□□□ -1.88
LDB3O75112 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
LDB3O75112 MLLT10P2-201ENST00000506434 249 ntBASIC3.29□□□□□ -1.88
LDB3O75112 KLHL2P1-201ENST00000508691 521 ntBASIC3.29□□□□□ -1.88
LDB3O75112 NDUFB4P9-201ENST00000511646 388 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AP006245.1-201ENST00000522549 120 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB3O75112 DEFB108D-201ENST00000527787 222 ntBASIC3.29□□□□□ -1.88
LDB3O75112 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LDB3O75112 AC023050.3-201ENST00000541142 333 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB3O75112 AC078814.3-201ENST00000553036 491 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB3O75112 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
LDB3O75112 AC011712.1-201ENST00000588959 234 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AC010525.2-201ENST00000590920 195 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AC012531.5-201ENST00000611375 151 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AC126177.8-201ENST00000618339 1015 ntBASIC3.29□□□□□ -1.88
LDB3O75112 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB3O75112 AL357559.1-201ENST00000622228 274 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AC090617.10-201ENST00000624308 134 ntBASIC3.29□□□□□ -1.88
LDB3O75112 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB3O75112 MTND1P37-201ENST00000636562 264 ntBASIC3.29□□□□□ -1.88
LDB3O75112 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB3O75112 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.29□□□□□ -1.88
LDB3O75112 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDB3O75112 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
LDB3O75112 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.29□□□□□ -1.88
LDB3O75112 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LDB3O75112 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LDB3O75112 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDB3O75112 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.28□□□□□ -1.88
LDB3O75112 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LDB3O75112 AC093908.1-201ENST00000623125 8092 ntBASIC3.28□□□□□ -1.88
LDB3O75112 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
LDB3O75112 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LDB3O75112 OR1S2-201ENST00000302592 978 ntBASIC3.28□□□□□ -1.88
LDB3O75112 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
LDB3O75112 RNU6-1120P-201ENST00000362988 108 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LDB3O75112 AL136116.1-201ENST00000403591 381 ntBASIC3.28□□□□□ -1.88
LDB3O75112 Z98941.1-201ENST00000407764 100 ntBASIC3.28□□□□□ -1.88
LDB3O75112 RNU2-43P-201ENST00000410306 190 ntBASIC3.28□□□□□ -1.88
LDB3O75112 RNU4-65P-201ENST00000410473 140 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AL354751.2-201ENST00000415471 210 ntBASIC3.28□□□□□ -1.88
LDB3O75112 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 AC018630.2-202ENST00000422992 927 ntBASIC3.28□□□□□ -1.88
LDB3O75112 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB3O75112 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 ATP5JP1-201ENST00000431631 322 ntBASIC3.28□□□□□ -1.88
LDB3O75112 CALM1P1-201ENST00000442082 433 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB3O75112 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 CEACAMP4-201ENST00000457676 421 ntBASIC3.28□□□□□ -1.88
LDB3O75112 SNRPGP3-201ENST00000469405 227 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AC106872.2-201ENST00000494303 480 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 FGF7P4-201ENST00000509595 295 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AC026801.2-201ENST00000515352 425 ntBASIC3.28□□□□□ -1.88
LDB3O75112 RNA5SP468-201ENST00000516782 93 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.28□□□□□ -1.88
LDB3O75112 AC107953.1-201ENST00000522216 297 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 SUB1P1-201ENST00000524415 382 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AC011979.2-201ENST00000527568 352 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AC026333.2-201ENST00000542164 106 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB3O75112 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB3O75112 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB3O75112 AC015917.1-201ENST00000579654 510 ntBASIC3.28□□□□□ -1.88
LDB3O75112 MIR4429-201ENST00000580105 73 ntBASIC3.28□□□□□ -1.88
LDB3O75112 AL034351.1-201ENST00000605288 668 ntBASIC3.28□□□□□ -1.88
LDB3O75112 MIR7851-201ENST00000610611 160 ntBASIC3.28□□□□□ -1.88
LDB3O75112 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB3O75112 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.28□□□□□ -1.88
LDB3O75112 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LDB3O75112 DDX10P1-201ENST00000448545 1933 ntBASIC3.28□□□□□ -1.88
LDB3O75112 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
LDB3O75112 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.28□□□□□ -1.88
LDB3O75112 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
LDB3O75112 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB3O75112 AF127577.6-201ENST00000623352 2191 ntBASIC3.28□□□□□ -1.88
LDB3O75112 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LDB3O75112 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LDB3O75112 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
LDB3O75112 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.28□□□□□ -1.89
LDB3O75112 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms