Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 RNA5SP44-201ENST00000410446 133 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFS4O43181 RPL31P12-201ENST00000422587 358 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 MED13P1-201ENST00000428342 171 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AC005326.1-201ENST00000429197 123 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 HMGB1P27-201ENST00000431429 603 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 GPR143P-201ENST00000434155 205 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFS4O43181 NANOGNBP1-201ENST00000448444 480 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AC115115.1-201ENST00000449927 248 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.1□□□□□ -1.91
NDUFS4O43181 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFS4O43181 RN7SL330P-201ENST00000469709 307 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AC034236.1-201ENST00000469891 373 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
NDUFS4O43181 AL135752.1-201ENST00000479477 471 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.1□□□□□ -1.91
NDUFS4O43181 AC007182.2-201ENST00000489251 402 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AC006445.2-201ENST00000510061 472 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 SNORD59.2-201ENST00000516873 68 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 RNA5SP291-201ENST00000517222 105 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFS4O43181 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFS4O43181 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFS4O43181 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFS4O43181 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.1□□□□□ -1.91
NDUFS4O43181 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFS4O43181 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFS4O43181 TRAV28-201ENST00000557548 323 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AC034105.3-201ENST00000565294 442 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.1□□□□□ -1.91
NDUFS4O43181 AC098848.2-201ENST00000588023 330 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 Z84480.1-201ENST00000605131 311 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AC136475.10-201ENST00000620253 385 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 AC138649.3-201ENST00000622154 254 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.1□□□□□ -1.91
NDUFS4O43181 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.1□□□□□ -1.91
NDUFS4O43181 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
NDUFS4O43181 TPTE2P4-201ENST00000258589 1605 ntBASIC3.1□□□□□ -1.91
NDUFS4O43181 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NDUFS4O43181 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
NDUFS4O43181 RIOK3P1-201ENST00000418778 1528 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 AL049641.1-201ENST00000441055 1948 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NDUFS4O43181 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
NDUFS4O43181 RNU6-288P-201ENST00000363690 104 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 Y_RNA.296-201ENST00000364930 108 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
NDUFS4O43181 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NDUFS4O43181 RNU6-946P-201ENST00000383878 107 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 RNU6-456P-201ENST00000384493 107 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 RNU6-14P-201ENST00000384630 106 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 AL139397.2-201ENST00000404529 772 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 RNU2-39P-201ENST00000410604 198 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 RNA5SP38-201ENST00000410750 119 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 MRPL50P2-201ENST00000416821 482 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.09□□□□□ -1.91
NDUFS4O43181 AL590664.1-201ENST00000448065 339 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.09□□□□□ -1.91
NDUFS4O43181 AC011825.1-201ENST00000484967 388 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 MTND2P33-201ENST00000506452 1031 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 MTND4LP22-201ENST00000508209 276 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.09□□□□□ -1.91
NDUFS4O43181 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.09□□□□□ -1.91
NDUFS4O43181 SNORA31.1-201ENST00000515993 133 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 SNORA31.3-201ENST00000516029 96 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 SNORA31.5-201ENST00000516190 133 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 RNU6-1231P-201ENST00000517185 103 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 SCARNA20.6-201ENST00000517251 106 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 ATP5F1P5-201ENST00000526403 760 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.09□□□□□ -1.91
NDUFS4O43181 AC022880.1-201ENST00000534017 973 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.09□□□□□ -1.91
NDUFS4O43181 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.09□□□□□ -1.91
NDUFS4O43181 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.09□□□□□ -1.91
NDUFS4O43181 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.09□□□□□ -1.91
NDUFS4O43181 HSPE1P7-201ENST00000604681 321 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 AL121992.2-201ENST00000606262 256 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 AC007998.5-201ENST00000622938 237 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NDUFS4O43181 MTND5P26-201ENST00000426018 1752 ntBASIC3.09□□□□□ -1.91
NDUFS4O43181 MTND5P1-201ENST00000445440 1375 ntBASIC3.09□□□□□ -1.92
NDUFS4O43181 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NDUFS4O43181 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.09□□□□□ -1.92
NDUFS4O43181 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
NDUFS4O43181 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
NDUFS4O43181 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NDUFS4O43181 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NDUFS4O43181 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NDUFS4O43181 RNU6-1167P-201ENST00000363227 94 ntBASIC3.08□□□□□ -1.92
NDUFS4O43181 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.08□□□□□ -1.92
NDUFS4O43181 AL357075.1-201ENST00000404107 726 ntBASIC3.08□□□□□ -1.92
NDUFS4O43181 GSTA9P-201ENST00000406231 611 ntBASIC3.08□□□□□ -1.92
NDUFS4O43181 RNA5SP120-201ENST00000410900 112 ntBASIC3.08□□□□□ -1.92
NDUFS4O43181 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.08□□□□□ -1.92
NDUFS4O43181 AC114491.1-201ENST00000416095 246 ntBASIC3.08□□□□□ -1.92
NDUFS4O43181 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms