Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
MSH4O15457 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
MSH4O15457 RPL21P132-201ENST00000331267 462 ntBASIC2.59□□□□□ -1.99
MSH4O15457 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
MSH4O15457 RNU6-223P-201ENST00000362830 107 ntBASIC2.59□□□□□ -1.99
MSH4O15457 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.59□□□□□ -1.99
MSH4O15457 SNORA3.2-201ENST00000408221 125 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AL359704.1-201ENST00000411586 781 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AC099548.1-201ENST00000421443 426 ntBASIC2.59□□□□□ -1.99
MSH4O15457 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.59□□□□□ -1.99
MSH4O15457 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.59□□□□□ -1.99
MSH4O15457 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.59□□□□□ -1.99
MSH4O15457 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.59□□□□□ -1.99
MSH4O15457 Z82210.1-201ENST00000440037 231 ntBASIC2.59□□□□□ -1.99
MSH4O15457 PIGFP3-201ENST00000441918 722 ntBASIC2.59□□□□□ -1.99
MSH4O15457 RPL23AP20-201ENST00000447965 421 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.59□□□□□ -1.99
MSH4O15457 MTND4LP3-201ENST00000468320 276 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.59□□□□□ -1.99
MSH4O15457 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.59□□□□□ -1.99
MSH4O15457 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.59□□□□□ -1.99
MSH4O15457 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.59□□□□□ -1.99
MSH4O15457 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.59□□□□□ -1.99
MSH4O15457 TRAV28-201ENST00000557548 323 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AC090888.1-201ENST00000561335 1141 ntBASIC2.59□□□□□ -1.99
MSH4O15457 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.59□□□□□ -1.99
MSH4O15457 AGGF1P5-201ENST00000567900 919 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.59□□□□□ -1.99
MSH4O15457 AC136618.2-201ENST00000575091 400 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AC002545.1-201ENST00000592511 181 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.59□□□□□ -1.99
MSH4O15457 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AC093838.1-201ENST00000613014 469 ntBASIC2.59□□□□□ -1.99
MSH4O15457 SDR42E1P2-201ENST00000614861 481 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.59□□□□□ -1.99
MSH4O15457 AP002782.1-201ENST00000623107 614 ntBASIC2.59□□□□□ -1.99
MSH4O15457 AC110079.1-202ENST00000635213 138 ntBASIC2.59□□□□□ -1.99
MSH4O15457 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
MSH4O15457 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -2
MSH4O15457 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.59□□□□□ -2
MSH4O15457 ELF2P3-201ENST00000445099 1506 ntBASIC2.58□□□□□ -2
MSH4O15457 RNU6-433P-201ENST00000363216 104 ntBASIC2.58□□□□□ -2
MSH4O15457 OR5H15-201ENST00000383696 930 ntBASIC2.58□□□□□ -2
MSH4O15457 BTF3P7-201ENST00000407097 488 ntBASIC2.58□□□□□ -2
MSH4O15457 RPL19P1-201ENST00000411635 428 ntBASIC2.58□□□□□ -2
MSH4O15457 HMGN2P30-201ENST00000423237 256 ntBASIC2.58□□□□□ -2
MSH4O15457 OOSP1P1-201ENST00000423265 274 ntBASIC2.58□□□□□ -2
MSH4O15457 AL445669.1-201ENST00000426743 755 ntBASIC2.58□□□□□ -2
MSH4O15457 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.58□□□□□ -2
MSH4O15457 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.58□□□□□ -2
MSH4O15457 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.58□□□□□ -2
MSH4O15457 BNIP3P2-201ENST00000441221 577 ntBASIC2.58□□□□□ -2
MSH4O15457 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.58□□□□□ -2
MSH4O15457 FAM103A2P-201ENST00000444122 354 ntBASIC2.58□□□□□ -2
MSH4O15457 AL606517.1-201ENST00000446914 387 ntBASIC2.58□□□□□ -2
MSH4O15457 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.58□□□□□ -2
MSH4O15457 ANKRD26P4-201ENST00000455755 950 ntBASIC2.58□□□□□ -2
MSH4O15457 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.58□□□□□ -2
MSH4O15457 RPL23AP49-201ENST00000492925 468 ntBASIC2.58□□□□□ -2
MSH4O15457 AC022447.3-201ENST00000506865 495 ntBASIC2.58□□□□□ -2
MSH4O15457 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.58□□□□□ -2
MSH4O15457 RNA5SP291-201ENST00000517222 105 ntBASIC2.58□□□□□ -2
MSH4O15457 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.58□□□□□ -2
MSH4O15457 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.58□□□□□ -2
MSH4O15457 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.58□□□□□ -2
MSH4O15457 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.58□□□□□ -2
MSH4O15457 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.58□□□□□ -2
MSH4O15457 AC105137.2-201ENST00000569073 466 ntBASIC2.58□□□□□ -2
MSH4O15457 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.58□□□□□ -2
MSH4O15457 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.58□□□□□ -2
MSH4O15457 BNIP3P23-201ENST00000599655 511 ntBASIC2.58□□□□□ -2
MSH4O15457 AL031281.1-201ENST00000604049 488 ntBASIC2.58□□□□□ -2
MSH4O15457 AC024560.3-201ENST00000608482 349 ntBASIC2.58□□□□□ -2
MSH4O15457 AC004696.1-201ENST00000614345 607 ntBASIC2.58□□□□□ -2
MSH4O15457 AL607023.1-201ENST00000620045 248 ntBASIC2.58□□□□□ -2
MSH4O15457 MIR6766-201ENST00000622641 72 ntBASIC2.58□□□□□ -2
MSH4O15457 AC112204.3-201ENST00000623822 332 ntBASIC2.58□□□□□ -2
MSH4O15457 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.58□□□□□ -2
MSH4O15457 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
MSH4O15457 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MSH4O15457 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.57□□□□□ -2
MSH4O15457 RNA5SP88-201ENST00000365560 109 ntBASIC2.57□□□□□ -2
MSH4O15457 RSL24D1P4-201ENST00000400938 484 ntBASIC2.57□□□□□ -2
MSH4O15457 AL109755.1-201ENST00000401791 649 ntBASIC2.57□□□□□ -2
MSH4O15457 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.57□□□□□ -2
MSH4O15457 MIR1305-201ENST00000408300 86 ntBASIC2.57□□□□□ -2
MSH4O15457 AL096701.2-201ENST00000416920 238 ntBASIC2.57□□□□□ -2
MSH4O15457 Z98742.3-201ENST00000418637 326 ntBASIC2.57□□□□□ -2
MSH4O15457 AL451054.2-201ENST00000420896 202 ntBASIC2.57□□□□□ -2
MSH4O15457 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.57□□□□□ -2
MSH4O15457 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.57□□□□□ -2
MSH4O15457 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.57□□□□□ -2
MSH4O15457 AL049734.2-201ENST00000441066 616 ntBASIC2.57□□□□□ -2
MSH4O15457 MTCO3P45-201ENST00000443036 613 ntBASIC2.57□□□□□ -2
MSH4O15457 UBBP3-201ENST00000445497 241 ntBASIC2.57□□□□□ -2
MSH4O15457 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.57□□□□□ -2
MSH4O15457 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.57□□□□□ -2
MSH4O15457 RPS20P22-201ENST00000473700 357 ntBASIC2.57□□□□□ -2
MSH4O15457 TRBV12-1-201ENST00000479785 344 ntBASIC2.57□□□□□ -2
MSH4O15457 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms