Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 CKS1BP7-201ENST00000522230 235 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 IGKV3-31-201ENST00000523109 329 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC007336.1-201ENST00000576365 3828 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 OR4K8P-201ENST00000578842 1048 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC020895.1-201ENST00000595362 272 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 PCMTD1P7-201ENST00000634506 357 ntBASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.38□□□□□ -2.03
TMX2-CTNND1H3BSU7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 Y_RNA.97-201ENST00000363094 102 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-660P-201ENST00000364566 109 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-359P-201ENST00000365466 108 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-744P-201ENST00000365557 107 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-1316P-201ENST00000384242 108 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL049545.1-201ENST00000401856 572 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC007064.1-201ENST00000412238 351 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC080125.1-201ENST00000414888 684 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 USP9YP26-201ENST00000421008 661 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL139415.2-201ENST00000431968 163 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 HMGB3P12-201ENST00000438745 556 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 WASF1P1-201ENST00000447560 1131 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 FDX1P2-201ENST00000450769 375 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU7-125P-201ENST00000458760 62 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 SETP11-201ENST00000473027 690 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC00888-204ENST00000487386 421 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC005178.1-201ENST00000508392 440 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC234781.5-201ENST00000508429 271 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC026241.1-201ENST00000517873 2142 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 CR383656.7-201ENST00000548164 174 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 MIR544B-201ENST00000582372 78 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC090616.2-202ENST00000584248 222 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AP000403.1-201ENST00000603349 851 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-88P-201ENST00000606801 100 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC004223.4-201ENST00000612426 332 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC002550.2-201ENST00000621246 394 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC079416.3-201ENST00000624479 549 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC092192.1-201ENST00000633154 1018 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC099063.3-201ENST00000642066 185 ntBASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TMX2-CTNND1H3BSU7 ZNF519P1-201ENST00000449011 1626 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-769P-201ENST00000384407 104 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AF228730.1-201ENST00000397972 663 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 RPS6P15-201ENST00000431996 751 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 UBE2FP3-201ENST00000436366 524 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 RPL23AP35-201ENST00000451906 501 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC073901.1-201ENST00000462471 408 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 RPS29P21-201ENST00000496272 170 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC024589.1-201ENST00000512207 263 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 RNU6-759P-201ENST00000516740 103 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC021269.2-201ENST00000532318 330 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC090888.1-201ENST00000561335 1141 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 MIR1273D-201ENST00000577266 86 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 NIFKP6-201ENST00000598115 845 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AL645944.1-201ENST00000603857 493 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC025811.1-201ENST00000604312 472 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC011890.2-201ENST00000613393 294 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC097655.1-201ENST00000635075 318 ntBASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
TMX2-CTNND1H3BSU7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 AC016717.2-201ENST00000609089 5141 ntBASIC2.35□□□□□ -2.03
TMX2-CTNND1H3BSU7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms