Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 BNIP3P24-201ENST00000593398 557 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AC092574.1-201ENST00000609771 420 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 MIR6788-201ENST00000618842 66 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 AP006248.3-201ENST00000623580 594 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.32□□□□□ -2.2
COL6A6A6NMZ7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AP001350.1-201ENST00000601906 1524 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 Y_RNA.25-201ENST00000362528 102 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 RNU6-1243P-201ENST00000364028 107 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 RNA5SP363-201ENST00000365072 115 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 SNORA51.12-201ENST00000384448 134 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 SSXP9-201ENST00000417503 292 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC018630.2-202ENST00000422992 927 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 EZH2P1-201ENST00000431167 291 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 RNF2P1-201ENST00000442955 1010 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 COX6CP12-201ENST00000446748 202 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC079776.3-201ENST00000450665 370 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 PRELID3BP4-201ENST00000515476 571 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC010376.1-201ENST00000522101 334 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 GLYCAM1-201ENST00000546596 285 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC093510.2-201ENST00000562820 896 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 MIR4637-201ENST00000582405 84 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC091895.1-201ENST00000624494 256 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC106858.1-201ENST00000637497 429 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 SGO1P1-201ENST00000603525 1447 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 RNU6-1066P-201ENST00000363573 105 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 HMGB3P2-201ENST00000411913 584 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 RPL17P12-201ENST00000413391 526 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 OFD1P18Y-201ENST00000420889 959 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 MTCO1P48-201ENST00000448024 1096 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 PNPLA4P1-201ENST00000458328 305 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 RPL21P103-201ENST00000479921 488 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 RNA5SP82-201ENST00000516707 92 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 ZNF705CP-201ENST00000530515 889 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 CYP3A137P-201ENST00000562436 69 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 ACTR3BP3-201ENST00000565577 979 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 SNORD84-203ENST00000584275 78 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 AC012254.4-201ENST00000588843 273 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 MIR6078-201ENST00000611069 100 ntBASIC1.31□□□□□ -2.2
COL6A6A6NMZ7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 HMGB1P5-201ENST00000255320 642 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 OR1L1-202ENST00000373686 1083 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 SNORA51.6-201ENST00000384151 125 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AL591034.1-201ENST00000407447 340 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 BX682237.1-201ENST00000415016 335 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 RPL7P30-201ENST00000420888 709 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 MTCO3P1-205ENST00000422088 832 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 NANOGP2-201ENST00000435391 727 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AL353718.1-201ENST00000451028 517 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AC004062.1-201ENST00000509926 645 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 RNU1-92P-201ENST00000517017 135 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 RNU6-1028P-201ENST00000517164 93 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AP000907.2-201ENST00000530827 353 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 MIR5708-201ENST00000579723 85 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AC005014.3-201ENST00000605985 190 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AC090116.1-201ENST00000615679 446 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 AL138880.2-201ENST00000616214 239 ntBASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.3□□□□□ -2.2
COL6A6A6NMZ7 FO624990.1-201ENST00000636373 85 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms