Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 AF038458.1-201ENST00000588406 262 ntBASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 AC007619.2-201ENST00000605743 379 ntBASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 AL021997.1-201ENST00000605757 193 ntBASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 OR2AS2P-201ENST00000606902 342 ntBASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 AP003476.1-201ENST00000623984 516 ntBASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
RBFOX3A6NFN3 MTND5P29-201ENST00000458676 1807 ntBASIC1.84□□□□□ -2.12
RBFOX3A6NFN3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC069528.2-201ENST00000624849 1991 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 OR5J1P-201ENST00000313544 939 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 OR56A5-201ENST00000340110 738 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 Y_RNA.245-201ENST00000364493 95 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 UBE2FP1-201ENST00000416536 447 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 USP9YP26-201ENST00000421008 661 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 RPL23AP76-201ENST00000441860 458 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AL135938.1-201ENST00000443141 297 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC020550.1-201ENST00000447385 163 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 MTND5P13-201ENST00000513046 1079 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC008837.2-201ENST00000513076 418 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 RNU1-40P-201ENST00000516816 164 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 RNU1-97P-201ENST00000516872 164 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC023538.1-201ENST00000534576 736 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC105137.2-201ENST00000569073 466 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 MTND3P13-201ENST00000574391 343 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC024619.4-201ENST00000580924 316 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AC012640.5-201ENST00000623897 319 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AL160394.1-201ENST00000624765 724 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 MTND4P35-201ENST00000604257 1375 ntBASIC1.83□□□□□ -2.12
RBFOX3A6NFN3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC004944.1-201ENST00000517807 3059 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 HSPE1P11-201ENST00000339579 310 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 RNA5SP138-201ENST00000365098 114 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 RPL17P12-201ENST00000413391 526 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 CYCSP48-201ENST00000417124 323 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 HMGN2P38-201ENST00000423806 265 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 SNRPEP7-201ENST00000438350 220 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 IPO7P1-201ENST00000442031 636 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC008481.1-201ENST00000463278 396 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 KLF3P2-201ENST00000465138 268 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC004263.1-201ENST00000479327 332 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 LINC00888-204ENST00000487386 421 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 RNU6-467P-201ENST00000517027 110 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 BNIP3P26-201ENST00000600827 554 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 AC090186.1-201ENST00000605991 572 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 MIR3199-2-201ENST00000636243 86 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 MTND5P30-201ENST00000452896 1731 ntBASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.82□□□□□ -2.12
RBFOX3A6NFN3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms