Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 AC246785.2-201ENST00000432512 513 ntBASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 TPSP2-201ENST00000561760 610 ntBASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 AL691432.3-201ENST00000621860 400 ntBASIC20.92■□□□□ 0.94
SCN10AQ9Y5Y9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 MIR3917-201ENST00000580971 93 ntBASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 AC092329.2-201ENST00000598402 547 ntBASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 AL391807.1-203ENST00000604392 2365 ntBASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCN10AQ9Y5Y9 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 PRELID1P1-202ENST00000567272 903 ntBASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 AL136038.4-201ENST00000603606 1261 ntBASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCN10AQ9Y5Y9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCN10AQ9Y5Y9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SCN10AQ9Y5Y9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SCN10AQ9Y5Y9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SCN10AQ9Y5Y9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.89■□□□□ 0.93
SCN10AQ9Y5Y9 TEX21P-204ENST00000641479 1693 ntBASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 AC012615.1-201ENST00000565797 1299 ntBASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN10AQ9Y5Y9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms