Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.31■□□□□ 0.36
HMG20AQ9NP66 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 AC097381.1-201ENST00000429019 1296 ntBASIC17.3■□□□□ 0.36
HMG20AQ9NP66 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 UBE2DNL-204ENST00000602536 740 ntBASIC17.3■□□□□ 0.36
HMG20AQ9NP66 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HMG20AQ9NP66 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 NTF6G-201ENST00000591094 616 ntBASIC17.29■□□□□ 0.36
HMG20AQ9NP66 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMG20AQ9NP66 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 AC007322.3-201ENST00000426526 701 ntBASIC17.28■□□□□ 0.36
HMG20AQ9NP66 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 MIR6821-201ENST00000617625 74 ntBASIC17.28■□□□□ 0.36
HMG20AQ9NP66 MYCNOS-205ENST00000641950 531 ntBASIC17.28■□□□□ 0.36
HMG20AQ9NP66 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms