Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 KRT18P67-201ENST00000432816 1264 ntBASIC20.29■□□□□ 0.84
CDH23Q9H251 AP001005.1-201ENST00000571755 1248 ntBASIC20.29■□□□□ 0.84
CDH23Q9H251 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.29■□□□□ 0.84
CDH23Q9H251 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH23Q9H251 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH23Q9H251 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH23Q9H251 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH23Q9H251 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH23Q9H251 AL160286.2-201ENST00000567150 934 ntBASIC20.29■□□□□ 0.84
CDH23Q9H251 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH23Q9H251 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.29■□□□□ 0.84
CDH23Q9H251 AC148477.8-201ENST00000624298 468 ntBASIC20.29■□□□□ 0.84
CDH23Q9H251 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH23Q9H251 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH23Q9H251 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH23Q9H251 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH23Q9H251 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CDH23Q9H251 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CDH23Q9H251 KRT16P6-202ENST00000425692 1426 ntBASIC20.29■□□□□ 0.84
CDH23Q9H251 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDH23Q9H251 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.29■□□□□ 0.84
CDH23Q9H251 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.29■□□□□ 0.84
CDH23Q9H251 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.29■□□□□ 0.84
CDH23Q9H251 MIR7706-201ENST00000613747 67 ntBASIC20.29■□□□□ 0.84
CDH23Q9H251 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDH23Q9H251 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CDH23Q9H251 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH23Q9H251 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
CDH23Q9H251 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH23Q9H251 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.28■□□□□ 0.84
CDH23Q9H251 AP001160.2-201ENST00000596071 487 ntBASIC20.28■□□□□ 0.84
CDH23Q9H251 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CDH23Q9H251 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.28■□□□□ 0.84
CDH23Q9H251 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CDH23Q9H251 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDH23Q9H251 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CDH23Q9H251 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.28■□□□□ 0.84
CDH23Q9H251 TP73-AS1-207ENST00000624167 988 ntBASIC20.28■□□□□ 0.84
CDH23Q9H251 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 PCDHAC2-203ENST00000615316 3011 ntBASIC20.27■□□□□ 0.84
CDH23Q9H251 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.27■□□□□ 0.84
CDH23Q9H251 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
CDH23Q9H251 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CDH23Q9H251 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.27■□□□□ 0.84
CDH23Q9H251 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.27■□□□□ 0.84
CDH23Q9H251 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.27■□□□□ 0.84
CDH23Q9H251 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 AC064862.7-201ENST00000604520 867 ntBASIC20.27■□□□□ 0.84
CDH23Q9H251 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.27■□□□□ 0.84
CDH23Q9H251 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CDH23Q9H251 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDH23Q9H251 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.27■□□□□ 0.83
CDH23Q9H251 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.26■□□□□ 0.83
CDH23Q9H251 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.26■□□□□ 0.83
CDH23Q9H251 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH23Q9H251 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH23Q9H251 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH23Q9H251 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH23Q9H251 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH23Q9H251 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDH23Q9H251 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH23Q9H251 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH23Q9H251 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDH23Q9H251 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH23Q9H251 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDH23Q9H251 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.26■□□□□ 0.83
CDH23Q9H251 AL035633.1-201ENST00000406139 838 ntBASIC20.26■□□□□ 0.83
CDH23Q9H251 AC140113.2-201ENST00000604370 208 ntBASIC20.26■□□□□ 0.83
CDH23Q9H251 AC007225.1-201ENST00000566331 1836 ntBASIC20.26■□□□□ 0.83
CDH23Q9H251 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.25■□□□□ 0.83
CDH23Q9H251 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH23Q9H251 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.25■□□□□ 0.83
CDH23Q9H251 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH23Q9H251 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDH23Q9H251 RNPS1P1-201ENST00000507437 918 ntBASIC20.25■□□□□ 0.83
CDH23Q9H251 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.25■□□□□ 0.83
CDH23Q9H251 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.25■□□□□ 0.83
CDH23Q9H251 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms