Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.98■□□□□ 0.47
SNIP1Q8TAD8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.98■□□□□ 0.47
SNIP1Q8TAD8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNIP1Q8TAD8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.98■□□□□ 0.47
SNIP1Q8TAD8 KRT18P1-202ENST00000452408 1331 ntBASIC17.98■□□□□ 0.47
SNIP1Q8TAD8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 AC106795.1-205ENST00000512851 1056 ntBASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 MIR4674-201ENST00000582457 87 ntBASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 LINC01465-201ENST00000408887 1940 ntBASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNIP1Q8TAD8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 CHCHD2P8-201ENST00000429873 447 ntBASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 AL121772.3-201ENST00000610840 674 ntBASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 AC006128.1-201ENST00000624704 1661 ntBASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNIP1Q8TAD8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
SNIP1Q8TAD8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
SNIP1Q8TAD8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
SNIP1Q8TAD8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 FEM1AP4-201ENST00000443167 1987 ntBASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 LINC01711-201ENST00000598340 967 ntBASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 AC093525.10-201ENST00000625130 1569 ntBASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.95■□□□□ 0.46
SNIP1Q8TAD8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 AC007225.1-201ENST00000566331 1836 ntBASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SNIP1Q8TAD8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms