Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 LTB4R2-202ENST00000528054 3092 ntBASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 AC083906.2-201ENST00000511578 360 ntBASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DNAAF1Q8NEP3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 AC006970.2-201ENST00000450065 779 ntBASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DNAAF1Q8NEP3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
DNAAF1Q8NEP3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.77■□□□□ 0.27
DNAAF1Q8NEP3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DNAAF1Q8NEP3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DNAAF1Q8NEP3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.77■□□□□ 0.27
DNAAF1Q8NEP3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.77■□□□□ 0.27
DNAAF1Q8NEP3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DNAAF1Q8NEP3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
DNAAF1Q8NEP3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
DNAAF1Q8NEP3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.77■□□□□ 0.27
DNAAF1Q8NEP3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 AL133373.2-201ENST00000623187 2828 ntBASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 AC135050.7-201ENST00000624508 2218 ntBASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 DUSP5P2-201ENST00000426873 1033 ntBASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 AL031598.1-201ENST00000561511 1773 ntBASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 AC020916.1-201ENST00000587762 1774 ntBASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 AC090164.3-201ENST00000610780 2143 ntBASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.76■□□□□ 0.27
DNAAF1Q8NEP3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms