Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC24.34■■□□□ 1.49
PROM2Q8N271 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
PROM2Q8N271 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PROM2Q8N271 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PROM2Q8N271 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.34■■□□□ 1.49
PROM2Q8N271 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PROM2Q8N271 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PROM2Q8N271 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PROM2Q8N271 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PROM2Q8N271 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PROM2Q8N271 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC24.33■■□□□ 1.49
PROM2Q8N271 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PROM2Q8N271 AL031284.1-201ENST00000419297 478 ntBASIC24.33■■□□□ 1.49
PROM2Q8N271 AC005104.2-201ENST00000427818 678 ntBASIC24.33■■□□□ 1.49
PROM2Q8N271 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC24.33■■□□□ 1.49
PROM2Q8N271 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
PROM2Q8N271 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC24.33■■□□□ 1.49
PROM2Q8N271 IGHV3-41-201ENST00000613121 348 ntBASIC24.33■■□□□ 1.49
PROM2Q8N271 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PROM2Q8N271 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
PROM2Q8N271 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.48
PROM2Q8N271 PMS2P7-201ENST00000506558 1336 ntBASIC24.33■■□□□ 1.48
PROM2Q8N271 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC24.32■■□□□ 1.48
PROM2Q8N271 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 FAM197Y8-203ENST00000450145 560 ntBASIC24.32■■□□□ 1.48
PROM2Q8N271 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 AC009065.1-201ENST00000564055 1225 ntBASIC24.32■■□□□ 1.48
PROM2Q8N271 IGHV3OR16-7-201ENST00000604106 360 ntBASIC24.32■■□□□ 1.48
PROM2Q8N271 AL390719.2-201ENST00000606993 987 ntBASIC24.32■■□□□ 1.48
PROM2Q8N271 AC055717.3-201ENST00000622967 595 ntBASIC24.32■■□□□ 1.48
PROM2Q8N271 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24.32■■□□□ 1.48
PROM2Q8N271 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.32■■□□□ 1.48
PROM2Q8N271 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PROM2Q8N271 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PROM2Q8N271 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PROM2Q8N271 AC243591.1-201ENST00000452967 1364 ntBASIC24.31■■□□□ 1.48
PROM2Q8N271 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PROM2Q8N271 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PROM2Q8N271 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PROM2Q8N271 GGCT-205ENST00000409436 954 ntTSL 3 BASIC24.31■■□□□ 1.48
PROM2Q8N271 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PROM2Q8N271 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC24.31■■□□□ 1.48
PROM2Q8N271 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.31■■□□□ 1.48
PROM2Q8N271 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC24.31■■□□□ 1.48
PROM2Q8N271 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PROM2Q8N271 RPL18-209ENST00000550645 463 ntTSL 5 BASIC24.31■■□□□ 1.48
PROM2Q8N271 RPL18-214ENST00000552588 559 ntTSL 3 BASIC24.31■■□□□ 1.48
PROM2Q8N271 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC24.31■■□□□ 1.48
PROM2Q8N271 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PROM2Q8N271 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC24.31■■□□□ 1.48
PROM2Q8N271 CCNC-219ENST00000627680 896 ntTSL 5 BASIC24.31■■□□□ 1.48
PROM2Q8N271 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PROM2Q8N271 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.31■■□□□ 1.48
PROM2Q8N271 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
PROM2Q8N271 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.31■■□□□ 1.48
PROM2Q8N271 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC24.3■■□□□ 1.48
PROM2Q8N271 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.3■■□□□ 1.48
PROM2Q8N271 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PROM2Q8N271 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC24.3■■□□□ 1.48
PROM2Q8N271 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC24.3■■□□□ 1.48
PROM2Q8N271 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC24.3■■□□□ 1.48
PROM2Q8N271 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC24.3■■□□□ 1.48
PROM2Q8N271 RNPS1P1-201ENST00000507437 918 ntBASIC24.3■■□□□ 1.48
PROM2Q8N271 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 AP005901.3-202ENST00000581653 237 ntBASIC24.3■■□□□ 1.48
PROM2Q8N271 AL355385.1-201ENST00000606123 409 ntBASIC24.3■■□□□ 1.48
PROM2Q8N271 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
PROM2Q8N271 AC112497.1-201ENST00000624824 639 ntBASIC24.3■■□□□ 1.48
PROM2Q8N271 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PROM2Q8N271 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PROM2Q8N271 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PROM2Q8N271 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PROM2Q8N271 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PROM2Q8N271 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PROM2Q8N271 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PROM2Q8N271 BX842568.4-201ENST00000421222 227 ntBASIC24.29■■□□□ 1.48
PROM2Q8N271 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC24.29■■□□□ 1.48
PROM2Q8N271 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC24.29■■□□□ 1.48
PROM2Q8N271 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC24.29■■□□□ 1.48
PROM2Q8N271 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.29■■□□□ 1.48
PROM2Q8N271 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC24.29■■□□□ 1.48
PROM2Q8N271 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC24.29■■□□□ 1.48
PROM2Q8N271 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms