Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.52■□□□□ 0.72
SIX5Q8N196 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SIX5Q8N196 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.52■□□□□ 0.71
SIX5Q8N196 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.52■□□□□ 0.71
SIX5Q8N196 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.51■□□□□ 0.71
SIX5Q8N196 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.51■□□□□ 0.71
SIX5Q8N196 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.51■□□□□ 0.71
SIX5Q8N196 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.51■□□□□ 0.71
SIX5Q8N196 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.51■□□□□ 0.71
SIX5Q8N196 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
SIX5Q8N196 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.51■□□□□ 0.71
SIX5Q8N196 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.51■□□□□ 0.71
SIX5Q8N196 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.51■□□□□ 0.71
SIX5Q8N196 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.51■□□□□ 0.71
SIX5Q8N196 AL732292.2-201ENST00000609649 430 ntBASIC19.51■□□□□ 0.71
SIX5Q8N196 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.51■□□□□ 0.71
SIX5Q8N196 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.51■□□□□ 0.71
SIX5Q8N196 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 AP001271.2-201ENST00000624018 1556 ntBASIC19.51■□□□□ 0.71
SIX5Q8N196 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.51■□□□□ 0.71
SIX5Q8N196 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SIX5Q8N196 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.51■□□□□ 0.71
SIX5Q8N196 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SIX5Q8N196 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.51■□□□□ 0.71
SIX5Q8N196 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.51■□□□□ 0.71
SIX5Q8N196 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.5■□□□□ 0.71
SIX5Q8N196 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SIX5Q8N196 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.5■□□□□ 0.71
SIX5Q8N196 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.5■□□□□ 0.71
SIX5Q8N196 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.5■□□□□ 0.71
SIX5Q8N196 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.5■□□□□ 0.71
SIX5Q8N196 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SIX5Q8N196 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.5■□□□□ 0.71
SIX5Q8N196 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.5■□□□□ 0.71
SIX5Q8N196 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.5■□□□□ 0.71
SIX5Q8N196 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.5■□□□□ 0.71
SIX5Q8N196 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.5■□□□□ 0.71
SIX5Q8N196 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.5■□□□□ 0.71
SIX5Q8N196 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SIX5Q8N196 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SIX5Q8N196 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.49■□□□□ 0.71
SIX5Q8N196 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SIX5Q8N196 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SIX5Q8N196 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SIX5Q8N196 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.49■□□□□ 0.71
SIX5Q8N196 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SIX5Q8N196 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.48■□□□□ 0.71
SIX5Q8N196 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.48■□□□□ 0.71
SIX5Q8N196 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
SIX5Q8N196 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.48■□□□□ 0.71
SIX5Q8N196 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SIX5Q8N196 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.48■□□□□ 0.71
SIX5Q8N196 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.48■□□□□ 0.71
SIX5Q8N196 KRT8P26-201ENST00000534154 1276 ntBASIC19.48■□□□□ 0.71
SIX5Q8N196 AL160237.2-201ENST00000556165 472 ntBASIC19.48■□□□□ 0.71
SIX5Q8N196 AC104692.2-201ENST00000603054 253 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms