Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC146Q8IYE0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 TSPY21P-201ENST00000433481 731 ntBASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 MFAP1P1-201ENST00000442257 1255 ntBASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC25.29■■□□□ 1.64
CCDC146Q8IYE0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 CKBP1-201ENST00000565489 1086 ntBASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 UBQLN4P1-201ENST00000461599 1801 ntBASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
CCDC146Q8IYE0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 AP000974.1-201ENST00000623909 2387 ntBASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CCDC146Q8IYE0 AC098818.2-201ENST00000564925 2320 ntBASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 BX088651.1-201ENST00000540551 451 ntBASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 DGCR10-201ENST00000609839 495 ntBASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CCDC146Q8IYE0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 AC096733.2-201ENST00000609937 1394 ntBASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 CYP2D8P-201ENST00000433633 1490 ntBASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCDC146Q8IYE0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
CCDC146Q8IYE0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms