Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF44Q7L0R7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF44Q7L0R7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF44Q7L0R7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 CYP2D8P-201ENST00000433633 1490 ntBASIC18.27■□□□□ 0.52
RNF44Q7L0R7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 NAPSB-206ENST00000562112 1266 ntBASIC18.27■□□□□ 0.52
RNF44Q7L0R7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF44Q7L0R7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
RNF44Q7L0R7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF44Q7L0R7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
RNF44Q7L0R7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.27■□□□□ 0.51
RNF44Q7L0R7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF44Q7L0R7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF44Q7L0R7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF44Q7L0R7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF44Q7L0R7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF44Q7L0R7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms