Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP50Q70EL3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
USP50Q70EL3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.53■■□□□ 1.2
USP50Q70EL3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
USP50Q70EL3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.53■■□□□ 1.2
USP50Q70EL3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP50Q70EL3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP50Q70EL3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP50Q70EL3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP50Q70EL3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
USP50Q70EL3 AP003733.1-201ENST00000491725 852 ntBASIC22.52■■□□□ 1.2
USP50Q70EL3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP50Q70EL3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC22.52■■□□□ 1.2
USP50Q70EL3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
USP50Q70EL3 AF238378.1-201ENST00000526806 358 ntBASIC22.52■■□□□ 1.2
USP50Q70EL3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.52■■□□□ 1.2
USP50Q70EL3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC22.52■■□□□ 1.2
USP50Q70EL3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.52■■□□□ 1.2
USP50Q70EL3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP50Q70EL3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
USP50Q70EL3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.52■■□□□ 1.2
USP50Q70EL3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
USP50Q70EL3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.52■■□□□ 1.2
USP50Q70EL3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.52■■□□□ 1.2
USP50Q70EL3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP50Q70EL3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
USP50Q70EL3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
USP50Q70EL3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
USP50Q70EL3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
USP50Q70EL3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
USP50Q70EL3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
USP50Q70EL3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP50Q70EL3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
USP50Q70EL3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.51■■□□□ 1.19
USP50Q70EL3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP50Q70EL3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.51■■□□□ 1.19
USP50Q70EL3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP50Q70EL3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP50Q70EL3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
USP50Q70EL3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
USP50Q70EL3 MIR1233-2-201ENST00000408138 82 ntBASIC22.51■■□□□ 1.19
USP50Q70EL3 MIR1233-1-201ENST00000408722 82 ntBASIC22.51■■□□□ 1.19
USP50Q70EL3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
USP50Q70EL3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
USP50Q70EL3 AC092865.5-201ENST00000545435 363 ntBASIC22.51■■□□□ 1.19
USP50Q70EL3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.51■■□□□ 1.19
USP50Q70EL3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP50Q70EL3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC22.51■■□□□ 1.19
USP50Q70EL3 AL773604.1-201ENST00000617417 272 ntBASIC22.51■■□□□ 1.19
USP50Q70EL3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
USP50Q70EL3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
USP50Q70EL3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
USP50Q70EL3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
USP50Q70EL3 AC079834.2-201ENST00000609776 1949 ntBASIC22.51■■□□□ 1.19
USP50Q70EL3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
USP50Q70EL3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
USP50Q70EL3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
USP50Q70EL3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP50Q70EL3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.5■■□□□ 1.19
USP50Q70EL3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
USP50Q70EL3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.5■■□□□ 1.19
USP50Q70EL3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP50Q70EL3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.5■■□□□ 1.19
USP50Q70EL3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.5■■□□□ 1.19
USP50Q70EL3 SLC25A1P1-201ENST00000528351 927 ntBASIC22.5■■□□□ 1.19
USP50Q70EL3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.5■■□□□ 1.19
USP50Q70EL3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC22.5■■□□□ 1.19
USP50Q70EL3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC22.5■■□□□ 1.19
USP50Q70EL3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.5■■□□□ 1.19
USP50Q70EL3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22.5■■□□□ 1.19
USP50Q70EL3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC22.5■■□□□ 1.19
USP50Q70EL3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
USP50Q70EL3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
USP50Q70EL3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.5■■□□□ 1.19
USP50Q70EL3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
USP50Q70EL3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.49■■□□□ 1.19
USP50Q70EL3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
USP50Q70EL3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
USP50Q70EL3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
USP50Q70EL3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
USP50Q70EL3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.49■■□□□ 1.19
USP50Q70EL3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
USP50Q70EL3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
USP50Q70EL3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.49■■□□□ 1.19
USP50Q70EL3 MOK-208ENST00000519058 917 ntTSL 2 BASIC22.49■■□□□ 1.19
USP50Q70EL3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.49■■□□□ 1.19
USP50Q70EL3 TP73-AS1-207ENST00000624167 988 ntBASIC22.49■■□□□ 1.19
USP50Q70EL3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.49■■□□□ 1.19
USP50Q70EL3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
USP50Q70EL3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.49■■□□□ 1.19
USP50Q70EL3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
USP50Q70EL3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
USP50Q70EL3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
USP50Q70EL3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
USP50Q70EL3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
USP50Q70EL3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.48■■□□□ 1.19
USP50Q70EL3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
USP50Q70EL3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
USP50Q70EL3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
USP50Q70EL3 FAM220CP-201ENST00000395253 831 ntBASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms