Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 CHCHD2P8-201ENST00000429873 447 ntBASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 FOSL1P1-201ENST00000511041 816 ntBASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 AL121672.3-201ENST00000608644 468 ntBASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
VPS13DQ5THJ4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
VPS13DQ5THJ4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC12.83□□□□□ -0.35
VPS13DQ5THJ4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC12.83□□□□□ -0.35
VPS13DQ5THJ4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
VPS13DQ5THJ4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
VPS13DQ5THJ4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
VPS13DQ5THJ4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.83□□□□□ -0.35
VPS13DQ5THJ4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 SLC25A1P1-201ENST00000528351 927 ntBASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 AC020907.5-201ENST00000624372 1936 ntBASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 AC091607.1-201ENST00000490318 1060 ntBASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VPS13DQ5THJ4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 KRT8P3-201ENST00000519669 1449 ntBASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 KRT8P26-201ENST00000534154 1276 ntBASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 TSPY22P-201ENST00000427496 604 ntBASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 AC005332.3-201ENST00000589904 676 ntBASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VPS13DQ5THJ4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 LINC00265-3P-201ENST00000447588 903 ntBASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 BX276092.5-203ENST00000456199 560 ntBASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 AL137060.1-201ENST00000618151 2648 ntBASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13DQ5THJ4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms