Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.41■□□□□ 0.86
CTC1Q2NKJ3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 CKBP1-201ENST00000565489 1086 ntBASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 AL512408.1-201ENST00000569378 2000 ntBASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTC1Q2NKJ3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CTC1Q2NKJ3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CTC1Q2NKJ3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.39■□□□□ 0.86
CTC1Q2NKJ3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CTC1Q2NKJ3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CTC1Q2NKJ3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.39■□□□□ 0.86
CTC1Q2NKJ3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CTC1Q2NKJ3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CTC1Q2NKJ3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 PVRIG2P-201ENST00000435460 978 ntBASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 NEK4P2-201ENST00000580004 1012 ntBASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 RN7SL510P-201ENST00000581311 263 ntBASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.39■□□□□ 0.85
CTC1Q2NKJ3 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 KRT8P8-201ENST00000434750 1448 ntBASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 LINC01311-201ENST00000565162 1445 ntBASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 AL160286.2-201ENST00000567150 934 ntBASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTC1Q2NKJ3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 SPDYE13P-201ENST00000445314 798 ntBASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 AC007225.1-201ENST00000566331 1836 ntBASIC20.37■□□□□ 0.85
CTC1Q2NKJ3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTC1Q2NKJ3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms