Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
HMGXB3Q12766 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC33.62■■■□□ 2.97
HMGXB3Q12766 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
HMGXB3Q12766 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC33.62■■■□□ 2.97
HMGXB3Q12766 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
HMGXB3Q12766 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
HMGXB3Q12766 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC33.62■■■□□ 2.97
HMGXB3Q12766 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC33.62■■■□□ 2.97
HMGXB3Q12766 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC33.62■■■□□ 2.97
HMGXB3Q12766 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC33.62■■■□□ 2.97
HMGXB3Q12766 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
HMGXB3Q12766 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC33.62■■■□□ 2.97
HMGXB3Q12766 GOLGA6L5P-202ENST00000515341 1828 ntBASIC33.62■■■□□ 2.97
HMGXB3Q12766 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
HMGXB3Q12766 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
HMGXB3Q12766 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC33.61■■■□□ 2.97
HMGXB3Q12766 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC33.61■■■□□ 2.97
HMGXB3Q12766 NUS1P2-201ENST00000417358 873 ntBASIC33.61■■■□□ 2.97
HMGXB3Q12766 AC064862.7-201ENST00000604520 867 ntBASIC33.61■■■□□ 2.97
HMGXB3Q12766 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
HMGXB3Q12766 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
HMGXB3Q12766 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
HMGXB3Q12766 KRT8P3-201ENST00000519669 1449 ntBASIC33.6■■■□□ 2.97
HMGXB3Q12766 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC33.6■■■□□ 2.97
HMGXB3Q12766 BX842568.4-201ENST00000421222 227 ntBASIC33.6■■■□□ 2.97
HMGXB3Q12766 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC33.6■■■□□ 2.97
HMGXB3Q12766 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC33.6■■■□□ 2.97
HMGXB3Q12766 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC33.6■■■□□ 2.97
HMGXB3Q12766 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
HMGXB3Q12766 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC33.6■■■□□ 2.97
HMGXB3Q12766 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC33.6■■■□□ 2.97
HMGXB3Q12766 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
HMGXB3Q12766 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC33.59■■■□□ 2.97
HMGXB3Q12766 COX10-202ENST00000429152 875 ntTSL 2 BASIC33.59■■■□□ 2.97
HMGXB3Q12766 RNPS1P1-201ENST00000507437 918 ntBASIC33.59■■■□□ 2.97
HMGXB3Q12766 AC106730.1-201ENST00000566722 1090 ntBASIC33.59■■■□□ 2.97
HMGXB3Q12766 ABBA01031661.1-201ENST00000634362 1253 ntBASIC33.59■■■□□ 2.97
HMGXB3Q12766 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC33.59■■■□□ 2.97
HMGXB3Q12766 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.97
HMGXB3Q12766 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.97
HMGXB3Q12766 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC33.59■■■□□ 2.97
HMGXB3Q12766 ZNF815P-204ENST00000434898 1737 ntBASIC33.59■■■□□ 2.97
HMGXB3Q12766 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 AC092865.5-201ENST00000545435 363 ntBASIC33.58■■■□□ 2.97
HMGXB3Q12766 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 AC104390.1-201ENST00000555663 520 ntBASIC33.58■■■□□ 2.97
HMGXB3Q12766 AC005332.3-201ENST00000589904 676 ntBASIC33.58■■■□□ 2.97
HMGXB3Q12766 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 HMGN1P19-201ENST00000436976 333 ntBASIC33.58■■■□□ 2.97
HMGXB3Q12766 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC33.58■■■□□ 2.97
HMGXB3Q12766 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC33.58■■■□□ 2.97
HMGXB3Q12766 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC33.57■■■□□ 2.97
HMGXB3Q12766 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
HMGXB3Q12766 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
HMGXB3Q12766 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC33.57■■■□□ 2.96
HMGXB3Q12766 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
HMGXB3Q12766 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC33.57■■■□□ 2.96
HMGXB3Q12766 AC091607.1-201ENST00000490318 1060 ntBASIC33.57■■■□□ 2.96
HMGXB3Q12766 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC33.57■■■□□ 2.96
HMGXB3Q12766 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC33.57■■■□□ 2.96
HMGXB3Q12766 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC33.57■■■□□ 2.96
HMGXB3Q12766 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
HMGXB3Q12766 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC33.56■■■□□ 2.96
HMGXB3Q12766 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
HMGXB3Q12766 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
HMGXB3Q12766 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
HMGXB3Q12766 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
HMGXB3Q12766 AL031284.1-201ENST00000419297 478 ntBASIC33.56■■■□□ 2.96
HMGXB3Q12766 AP003733.1-201ENST00000491725 852 ntBASIC33.56■■■□□ 2.96
HMGXB3Q12766 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC33.56■■■□□ 2.96
HMGXB3Q12766 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC33.56■■■□□ 2.96
HMGXB3Q12766 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC33.56■■■□□ 2.96
HMGXB3Q12766 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC33.56■■■□□ 2.96
HMGXB3Q12766 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC33.56■■■□□ 2.96
HMGXB3Q12766 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC33.56■■■□□ 2.96
HMGXB3Q12766 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC33.56■■■□□ 2.96
HMGXB3Q12766 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
HMGXB3Q12766 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC33.55■■■□□ 2.96
HMGXB3Q12766 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
HMGXB3Q12766 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC33.55■■■□□ 2.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms