Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PER3P56645 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.63■□□□□ 0.41
PER3P56645 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.63■□□□□ 0.41
PER3P56645 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 AC022616.7-201ENST00000525383 220 ntBASIC17.63■□□□□ 0.41
PER3P56645 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.63■□□□□ 0.41
PER3P56645 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PER3P56645 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.63■□□□□ 0.41
PER3P56645 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.63■□□□□ 0.41
PER3P56645 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.63■□□□□ 0.41
PER3P56645 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.63■□□□□ 0.41
PER3P56645 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.63■□□□□ 0.41
PER3P56645 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PER3P56645 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.63■□□□□ 0.41
PER3P56645 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PER3P56645 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PER3P56645 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 NEFHP1-201ENST00000412845 2629 ntBASIC17.62■□□□□ 0.41
PER3P56645 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.62■□□□□ 0.41
PER3P56645 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PER3P56645 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 TSPY14P-201ENST00000303979 915 ntBASIC17.62■□□□□ 0.41
PER3P56645 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 AC006011.2-201ENST00000621313 1158 ntBASIC17.62■□□□□ 0.41
PER3P56645 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PER3P56645 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
PER3P56645 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.62■□□□□ 0.41
PER3P56645 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PER3P56645 AP006587.1-201ENST00000534129 1502 ntBASIC17.62■□□□□ 0.41
PER3P56645 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PER3P56645 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PER3P56645 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PER3P56645 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.61■□□□□ 0.41
PER3P56645 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PER3P56645 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PER3P56645 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PER3P56645 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PER3P56645 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PER3P56645 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PER3P56645 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.61■□□□□ 0.41
PER3P56645 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PER3P56645 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PER3P56645 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
PER3P56645 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PER3P56645 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PER3P56645 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PER3P56645 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.61■□□□□ 0.41
PER3P56645 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PER3P56645 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PER3P56645 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PER3P56645 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
PER3P56645 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
PER3P56645 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PER3P56645 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PER3P56645 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PER3P56645 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PER3P56645 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PER3P56645 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PER3P56645 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PER3P56645 ECEL1P2-202ENST00000465689 757 ntBASIC17.6■□□□□ 0.41
PER3P56645 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.6■□□□□ 0.41
PER3P56645 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PER3P56645 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.6■□□□□ 0.41
PER3P56645 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.6■□□□□ 0.41
PER3P56645 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.6■□□□□ 0.41
PER3P56645 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.6■□□□□ 0.41
PER3P56645 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.6■□□□□ 0.41
PER3P56645 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PER3P56645 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PER3P56645 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PER3P56645 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PER3P56645 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PER3P56645 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.6■□□□□ 0.41
PER3P56645 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.6■□□□□ 0.41
PER3P56645 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PER3P56645 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms