Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19■□□□□ 0.63
NUBP1P53384 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19■□□□□ 0.63
NUBP1P53384 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
NUBP1P53384 AP001160.2-201ENST00000596071 487 ntBASIC19■□□□□ 0.63
NUBP1P53384 AL157888.1-201ENST00000631930 593 ntBASIC19■□□□□ 0.63
NUBP1P53384 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NUBP1P53384 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NUBP1P53384 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
NUBP1P53384 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NUBP1P53384 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19■□□□□ 0.63
NUBP1P53384 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
NUBP1P53384 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NUBP1P53384 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.99■□□□□ 0.63
NUBP1P53384 AL049796.1-201ENST00000565336 1766 ntBASIC18.99■□□□□ 0.63
NUBP1P53384 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.99■□□□□ 0.63
NUBP1P53384 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUBP1P53384 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUBP1P53384 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUBP1P53384 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUBP1P53384 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.99■□□□□ 0.63
NUBP1P53384 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUBP1P53384 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NUBP1P53384 UPF3AP3-201ENST00000420996 769 ntBASIC18.99■□□□□ 0.63
NUBP1P53384 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUBP1P53384 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.99■□□□□ 0.63
NUBP1P53384 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.99■□□□□ 0.63
NUBP1P53384 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.99■□□□□ 0.63
NUBP1P53384 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.99■□□□□ 0.63
NUBP1P53384 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.99■□□□□ 0.63
NUBP1P53384 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NUBP1P53384 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUBP1P53384 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.99■□□□□ 0.63
NUBP1P53384 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUBP1P53384 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUBP1P53384 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUBP1P53384 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUBP1P53384 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
NUBP1P53384 AP001271.2-201ENST00000624018 1556 ntBASIC18.98■□□□□ 0.63
NUBP1P53384 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUBP1P53384 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUBP1P53384 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
NUBP1P53384 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUBP1P53384 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUBP1P53384 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC18.98■□□□□ 0.63
NUBP1P53384 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC18.98■□□□□ 0.63
NUBP1P53384 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUBP1P53384 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUBP1P53384 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC18.98■□□□□ 0.63
NUBP1P53384 AC139887.3-201ENST00000568585 713 ntBASIC18.98■□□□□ 0.63
NUBP1P53384 MIR3197-201ENST00000582241 73 ntBASIC18.98■□□□□ 0.63
NUBP1P53384 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC18.98■□□□□ 0.63
NUBP1P53384 AC005332.3-201ENST00000589904 676 ntBASIC18.98■□□□□ 0.63
NUBP1P53384 AC022960.2-201ENST00000616300 666 ntBASIC18.98■□□□□ 0.63
NUBP1P53384 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.98■□□□□ 0.63
NUBP1P53384 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NUBP1P53384 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUBP1P53384 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NUBP1P53384 CLDN5-201ENST00000403084 2357 ntBASIC18.97■□□□□ 0.63
NUBP1P53384 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUBP1P53384 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC18.97■□□□□ 0.63
NUBP1P53384 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.97■□□□□ 0.63
NUBP1P53384 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.97■□□□□ 0.63
NUBP1P53384 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUBP1P53384 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.97■□□□□ 0.63
NUBP1P53384 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.97■□□□□ 0.63
NUBP1P53384 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC18.97■□□□□ 0.63
NUBP1P53384 AC009065.1-201ENST00000564055 1225 ntBASIC18.97■□□□□ 0.63
NUBP1P53384 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.97■□□□□ 0.63
NUBP1P53384 AL353729.2-201ENST00000605859 1249 ntBASIC18.97■□□□□ 0.63
NUBP1P53384 AL390719.2-201ENST00000606993 987 ntBASIC18.97■□□□□ 0.63
NUBP1P53384 AC112497.1-201ENST00000624824 639 ntBASIC18.97■□□□□ 0.63
NUBP1P53384 LINC01465-201ENST00000408887 1940 ntBASIC18.97■□□□□ 0.63
NUBP1P53384 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUBP1P53384 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUBP1P53384 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.97■□□□□ 0.63
NUBP1P53384 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NUBP1P53384 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.97■□□□□ 0.63
NUBP1P53384 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.97■□□□□ 0.63
NUBP1P53384 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.96■□□□□ 0.63
NUBP1P53384 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.96■□□□□ 0.63
NUBP1P53384 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NUBP1P53384 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.96■□□□□ 0.63
NUBP1P53384 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC18.96■□□□□ 0.63
NUBP1P53384 PGAM5P1-201ENST00000518923 814 ntBASIC18.96■□□□□ 0.63
NUBP1P53384 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.96■□□□□ 0.63
NUBP1P53384 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.96■□□□□ 0.63
NUBP1P53384 MIR3180-5-201ENST00000583743 153 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms