Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC13P31276 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HOXC13P31276 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HOXC13P31276 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXC13P31276 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXC13P31276 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HOXC13P31276 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXC13P31276 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXC13P31276 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXC13P31276 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXC13P31276 YBX1P2-201ENST00000489612 999 ntBASIC19.76■□□□□ 0.75
HOXC13P31276 KRT18P56-201ENST00000507275 550 ntBASIC19.76■□□□□ 0.75
HOXC13P31276 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HOXC13P31276 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.76■□□□□ 0.75
HOXC13P31276 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
HOXC13P31276 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
HOXC13P31276 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
HOXC13P31276 AP000692.2-201ENST00000608391 879 ntBASIC19.76■□□□□ 0.75
HOXC13P31276 DGCR10-201ENST00000609839 495 ntBASIC19.76■□□□□ 0.75
HOXC13P31276 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HOXC13P31276 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXC13P31276 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXC13P31276 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC13P31276 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.75■□□□□ 0.75
HOXC13P31276 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXC13P31276 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HOXC13P31276 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
HOXC13P31276 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
HOXC13P31276 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXC13P31276 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.75■□□□□ 0.75
HOXC13P31276 TSPY23P-201ENST00000440136 739 ntBASIC19.75■□□□□ 0.75
HOXC13P31276 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC13P31276 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC13P31276 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXC13P31276 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.75■□□□□ 0.75
HOXC13P31276 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC13P31276 AC011298.2-201ENST00000617989 482 ntBASIC19.75■□□□□ 0.75
HOXC13P31276 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC13P31276 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HOXC13P31276 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC13P31276 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXC13P31276 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXC13P31276 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
HOXC13P31276 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HOXC13P31276 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC13P31276 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC13P31276 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXC13P31276 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXC13P31276 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC13P31276 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC13P31276 FAM8A6P-201ENST00000407496 1135 ntBASIC19.74■□□□□ 0.75
HOXC13P31276 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.74■□□□□ 0.75
HOXC13P31276 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HOXC13P31276 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXC13P31276 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HOXC13P31276 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC13P31276 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
HOXC13P31276 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HOXC13P31276 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXC13P31276 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXC13P31276 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HOXC13P31276 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC13P31276 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC13P31276 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HOXC13P31276 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC13P31276 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXC13P31276 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms