Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VCANP13611 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
VCANP13611 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.76■□□□□ 0.75
VCANP13611 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCANP13611 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VCANP13611 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCANP13611 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VCANP13611 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VCANP13611 IGHV3-47-201ENST00000425060 335 ntBASIC19.75■□□□□ 0.75
VCANP13611 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.75■□□□□ 0.75
VCANP13611 AC099336.1-202ENST00000602961 463 ntBASIC19.75■□□□□ 0.75
VCANP13611 AC233702.3-201ENST00000578656 1387 ntBASIC19.75■□□□□ 0.75
VCANP13611 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.75■□□□□ 0.75
VCANP13611 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
VCANP13611 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.75■□□□□ 0.75
VCANP13611 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCANP13611 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCANP13611 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
VCANP13611 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
VCANP13611 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.75■□□□□ 0.75
VCANP13611 AC034105.1-201ENST00000563488 319 ntBASIC19.75■□□□□ 0.75
VCANP13611 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.75■□□□□ 0.75
VCANP13611 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCANP13611 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.75■□□□□ 0.75
VCANP13611 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VCANP13611 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCANP13611 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.75■□□□□ 0.75
VCANP13611 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.75■□□□□ 0.75
VCANP13611 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.75■□□□□ 0.75
VCANP13611 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
VCANP13611 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VCANP13611 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VCANP13611 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.75■□□□□ 0.75
VCANP13611 FAM197Y3-203ENST00000618346 717 ntBASIC19.75■□□□□ 0.75
VCANP13611 FAM215A-202ENST00000632077 792 ntBASIC19.75■□□□□ 0.75
VCANP13611 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCANP13611 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.74■□□□□ 0.75
VCANP13611 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCANP13611 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.74■□□□□ 0.75
VCANP13611 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCANP13611 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.74■□□□□ 0.75
VCANP13611 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
VCANP13611 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.74■□□□□ 0.75
VCANP13611 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCANP13611 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VCANP13611 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VCANP13611 AC093909.1-201ENST00000504731 1122 ntBASIC19.74■□□□□ 0.75
VCANP13611 AC024243.1-201ENST00000609234 778 ntBASIC19.74■□□□□ 0.75
VCANP13611 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.74■□□□□ 0.75
VCANP13611 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.74■□□□□ 0.75
VCANP13611 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCANP13611 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCANP13611 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VCANP13611 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
VCANP13611 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.74■□□□□ 0.75
VCANP13611 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.74■□□□□ 0.75
VCANP13611 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.74■□□□□ 0.75
VCANP13611 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.74■□□□□ 0.75
VCANP13611 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.73■□□□□ 0.75
VCANP13611 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.73■□□□□ 0.75
VCANP13611 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.73■□□□□ 0.75
VCANP13611 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VCANP13611 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 AL591424.1-201ENST00000442569 1213 ntBASIC19.73■□□□□ 0.75
VCANP13611 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.73■□□□□ 0.75
VCANP13611 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VCANP13611 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
VCANP13611 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.73■□□□□ 0.75
VCANP13611 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCANP13611 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCANP13611 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.72■□□□□ 0.75
VCANP13611 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.72■□□□□ 0.75
VCANP13611 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.72■□□□□ 0.75
VCANP13611 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.72■□□□□ 0.75
VCANP13611 AC036111.1-201ENST00000533973 1582 ntBASIC19.72■□□□□ 0.75
VCANP13611 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
VCANP13611 AC233723.2-201ENST00000623798 2106 ntBASIC19.72■□□□□ 0.75
VCANP13611 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCANP13611 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
VCANP13611 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VCANP13611 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCANP13611 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VCANP13611 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCANP13611 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.72■□□□□ 0.75
VCANP13611 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VCANP13611 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.72■□□□□ 0.75
VCANP13611 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCANP13611 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCANP13611 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCANP13611 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCANP13611 KRT8P17-201ENST00000453110 1448 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms