Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL2P13500 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CCL2P13500 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.64■□□□□ 0.25
CCL2P13500 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL2P13500 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
CCL2P13500 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL2P13500 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL2P13500 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL2P13500 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.64■□□□□ 0.25
CCL2P13500 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL2P13500 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCL2P13500 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CCL2P13500 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCL2P13500 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL2P13500 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
CCL2P13500 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCL2P13500 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL2P13500 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCL2P13500 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL2P13500 TSPY15P-201ENST00000457163 923 ntBASIC16.63■□□□□ 0.25
CCL2P13500 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL2P13500 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.63■□□□□ 0.25
CCL2P13500 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL2P13500 AC026271.3-201ENST00000571884 352 ntBASIC16.63■□□□□ 0.25
CCL2P13500 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.63■□□□□ 0.25
CCL2P13500 MIR4785-201ENST00000585005 73 ntBASIC16.63■□□□□ 0.25
CCL2P13500 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 AL049812.1-201ENST00000432563 2267 ntBASIC16.63■□□□□ 0.25
CCL2P13500 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 AC141586.3-201ENST00000562166 1838 ntBASIC16.63■□□□□ 0.25
CCL2P13500 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCL2P13500 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.63■□□□□ 0.25
CCL2P13500 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL2P13500 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 FSCN1P1-201ENST00000568912 1481 ntBASIC16.62■□□□□ 0.25
CCL2P13500 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL2P13500 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL2P13500 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL2P13500 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCL2P13500 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCL2P13500 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL2P13500 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL2P13500 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.62■□□□□ 0.25
CCL2P13500 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.62■□□□□ 0.25
CCL2P13500 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL2P13500 AC130371.2-201ENST00000619443 611 ntBASIC16.62■□□□□ 0.25
CCL2P13500 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCL2P13500 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CCL2P13500 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.62■□□□□ 0.25
CCL2P13500 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.62■□□□□ 0.25
CCL2P13500 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCL2P13500 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL2P13500 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.61■□□□□ 0.25
CCL2P13500 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCL2P13500 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL2P13500 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL2P13500 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL2P13500 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL2P13500 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL2P13500 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL2P13500 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CCL2P13500 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.61■□□□□ 0.25
CCL2P13500 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.61■□□□□ 0.25
CCL2P13500 AC116562.2-201ENST00000507042 360 ntBASIC16.61■□□□□ 0.25
CCL2P13500 AL355075.4-201ENST00000554988 638 ntBASIC16.61■□□□□ 0.25
CCL2P13500 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CCL2P13500 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCL2P13500 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCL2P13500 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL2P13500 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.61■□□□□ 0.25
CCL2P13500 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CCL2P13500 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCL2P13500 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.61■□□□□ 0.25
CCL2P13500 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.6■□□□□ 0.25
CCL2P13500 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms