Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC079602.3-201ENST00000623931 403 ntBASIC20.19■□□□□ 0.82
RB1P06400 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.19■□□□□ 0.82
RB1P06400 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
RB1P06400 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.19■□□□□ 0.82
RB1P06400 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RB1P06400 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RB1P06400 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RB1P06400 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RB1P06400 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RB1P06400 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RB1P06400 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.18■□□□□ 0.82
RB1P06400 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 AC036111.1-201ENST00000533973 1582 ntBASIC20.18■□□□□ 0.82
RB1P06400 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RB1P06400 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RB1P06400 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RB1P06400 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 TSPY22P-201ENST00000427496 604 ntBASIC20.18■□□□□ 0.82
RB1P06400 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RB1P06400 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.18■□□□□ 0.82
RB1P06400 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.18■□□□□ 0.82
RB1P06400 AC091304.2-201ENST00000564639 760 ntBASIC20.18■□□□□ 0.82
RB1P06400 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.18■□□□□ 0.82
RB1P06400 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.18■□□□□ 0.82
RB1P06400 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.18■□□□□ 0.82
RB1P06400 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.18■□□□□ 0.82
RB1P06400 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.18■□□□□ 0.82
RB1P06400 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.18■□□□□ 0.82
RB1P06400 LINC01711-201ENST00000598340 967 ntBASIC20.18■□□□□ 0.82
RB1P06400 AL136038.4-201ENST00000603606 1261 ntBASIC20.18■□□□□ 0.82
RB1P06400 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.18■□□□□ 0.82
RB1P06400 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RB1P06400 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.18■□□□□ 0.82
RB1P06400 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RB1P06400 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RB1P06400 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RB1P06400 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RB1P06400 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.18■□□□□ 0.82
RB1P06400 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.17■□□□□ 0.82
RB1P06400 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RB1P06400 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
RB1P06400 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RB1P06400 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.17■□□□□ 0.82
RB1P06400 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.17■□□□□ 0.82
RB1P06400 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.17■□□□□ 0.82
RB1P06400 MCCD1P1-208ENST00000445732 328 ntBASIC20.17■□□□□ 0.82
RB1P06400 EMBP1-201ENST00000458200 901 ntBASIC20.17■□□□□ 0.82
RB1P06400 AL160237.2-201ENST00000556165 472 ntBASIC20.17■□□□□ 0.82
RB1P06400 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.17■□□□□ 0.82
RB1P06400 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.17■□□□□ 0.82
RB1P06400 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.17■□□□□ 0.82
RB1P06400 AP005212.1-201ENST00000581547 1997 ntBASIC20.17■□□□□ 0.82
RB1P06400 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RB1P06400 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.17■□□□□ 0.82
RB1P06400 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RB1P06400 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RB1P06400 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RB1P06400 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RB1P06400 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RB1P06400 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.16■□□□□ 0.82
RB1P06400 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.16■□□□□ 0.82
RB1P06400 MIR3917-201ENST00000580971 93 ntBASIC20.16■□□□□ 0.82
RB1P06400 AC104692.2-201ENST00000603054 253 ntBASIC20.16■□□□□ 0.82
RB1P06400 AC112497.1-201ENST00000624824 639 ntBASIC20.16■□□□□ 0.82
RB1P06400 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.16■□□□□ 0.82
RB1P06400 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RB1P06400 AL391807.1-203ENST00000604392 2365 ntBASIC20.16■□□□□ 0.82
RB1P06400 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.16■□□□□ 0.82
RB1P06400 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RB1P06400 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RB1P06400 ZNF815P-204ENST00000434898 1737 ntBASIC20.16■□□□□ 0.82
RB1P06400 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RB1P06400 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.16■□□□□ 0.82
RB1P06400 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.16■□□□□ 0.82
RB1P06400 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.15■□□□□ 0.82
RB1P06400 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RB1P06400 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.15■□□□□ 0.82
RB1P06400 AC009078.2-202ENST00000463353 338 ntBASIC20.15■□□□□ 0.82
RB1P06400 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RB1P06400 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RB1P06400 TPSP2-201ENST00000561760 610 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms