Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC28A2O43868 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SLC28A2O43868 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC28A2O43868 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC28A2O43868 AL450487.1-201ENST00000426799 995 ntBASIC18.37■□□□□ 0.53
SLC28A2O43868 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC28A2O43868 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC28A2O43868 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC28A2O43868 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.37■□□□□ 0.53
SLC28A2O43868 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
SLC28A2O43868 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.37■□□□□ 0.53
SLC28A2O43868 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC28A2O43868 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
SLC28A2O43868 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC28A2O43868 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC28A2O43868 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SLC28A2O43868 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
SLC28A2O43868 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLC28A2O43868 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLC28A2O43868 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC28A2O43868 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC28A2O43868 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.36■□□□□ 0.53
SLC28A2O43868 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC28A2O43868 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC28A2O43868 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SLC28A2O43868 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC28A2O43868 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC28A2O43868 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC28A2O43868 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC28A2O43868 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SLC28A2O43868 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLC28A2O43868 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC28A2O43868 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC28A2O43868 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC28A2O43868 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 AC009947.2-201ENST00000444014 672 ntBASIC18.35■□□□□ 0.53
SLC28A2O43868 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC28A2O43868 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SLC28A2O43868 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SLC28A2O43868 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SLC28A2O43868 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC28A2O43868 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC28A2O43868 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 AC018445.3-201ENST00000624177 1945 ntBASIC18.35■□□□□ 0.53
SLC28A2O43868 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC28A2O43868 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC28A2O43868 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC28A2O43868 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC28A2O43868 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC28A2O43868 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC28A2O43868 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SLC28A2O43868 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC28A2O43868 DUSP5P1-201ENST00000441325 1139 ntBASIC18.34■□□□□ 0.53
SLC28A2O43868 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SLC28A2O43868 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC28A2O43868 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SLC28A2O43868 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC28A2O43868 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SLC28A2O43868 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms