Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL391807.1-203ENST00000604392 2365 ntBASIC32.7■■■□□ 2.82
CUX2O14529 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
CUX2O14529 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.82
CUX2O14529 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CUX2O14529 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CUX2O14529 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CUX2O14529 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
CUX2O14529 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC32.69■■■□□ 2.82
CUX2O14529 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC32.69■■■□□ 2.82
CUX2O14529 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC32.69■■■□□ 2.82
CUX2O14529 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
CUX2O14529 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CUX2O14529 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC32.68■■■□□ 2.82
CUX2O14529 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CUX2O14529 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CUX2O14529 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC32.68■■■□□ 2.82
CUX2O14529 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC32.68■■■□□ 2.82
CUX2O14529 AC024243.1-201ENST00000609234 778 ntBASIC32.68■■■□□ 2.82
CUX2O14529 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
CUX2O14529 FAM215A-202ENST00000632077 792 ntBASIC32.68■■■□□ 2.82
CUX2O14529 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC32.68■■■□□ 2.82
CUX2O14529 NSUN5P1-202ENST00000421140 1535 ntBASIC32.68■■■□□ 2.82
CUX2O14529 NSUN5P2-203ENST00000457352 1529 ntBASIC32.68■■■□□ 2.82
CUX2O14529 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
CUX2O14529 BUB3-202ENST00000368859 667 ntTSL 3 BASIC32.67■■■□□ 2.82
CUX2O14529 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC32.67■■■□□ 2.82
CUX2O14529 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC32.67■■■□□ 2.82
CUX2O14529 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CUX2O14529 IGHV3-22-201ENST00000520721 359 ntBASIC32.67■■■□□ 2.82
CUX2O14529 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC32.67■■■□□ 2.82
CUX2O14529 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC32.67■■■□□ 2.82
CUX2O14529 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC32.67■■■□□ 2.82
CUX2O14529 KRT18P28-201ENST00000453838 1332 ntBASIC32.67■■■□□ 2.82
CUX2O14529 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC32.67■■■□□ 2.82
CUX2O14529 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC32.67■■■□□ 2.82
CUX2O14529 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CUX2O14529 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC32.67■■■□□ 2.82
CUX2O14529 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
CUX2O14529 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
CUX2O14529 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC32.67■■■□□ 2.82
CUX2O14529 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC32.67■■■□□ 2.82
CUX2O14529 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC32.67■■■□□ 2.82
CUX2O14529 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC32.67■■■□□ 2.82
CUX2O14529 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC32.67■■■□□ 2.82
CUX2O14529 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC32.67■■■□□ 2.82
CUX2O14529 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC32.66■■■□□ 2.82
CUX2O14529 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC32.66■■■□□ 2.82
CUX2O14529 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CUX2O14529 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC32.66■■■□□ 2.82
CUX2O14529 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC32.66■■■□□ 2.82
CUX2O14529 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
CUX2O14529 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CUX2O14529 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CUX2O14529 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
CUX2O14529 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CUX2O14529 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC32.66■■■□□ 2.82
CUX2O14529 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC32.66■■■□□ 2.82
CUX2O14529 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
CUX2O14529 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
CUX2O14529 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC32.66■■■□□ 2.82
CUX2O14529 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
CUX2O14529 Z83836.1-201ENST00000624605 1642 ntBASIC32.66■■■□□ 2.82
CUX2O14529 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC32.65■■■□□ 2.82
CUX2O14529 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC32.65■■■□□ 2.82
CUX2O14529 SEC1P-202ENST00000473944 940 ntBASIC32.65■■■□□ 2.82
CUX2O14529 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC32.65■■■□□ 2.82
CUX2O14529 IRF8-202ENST00000562492 946 ntTSL 3 BASIC32.65■■■□□ 2.82
CUX2O14529 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC32.65■■■□□ 2.82
CUX2O14529 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CUX2O14529 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC32.65■■■□□ 2.82
CUX2O14529 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
CUX2O14529 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CUX2O14529 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CUX2O14529 BID-212ENST00000614949 1988 ntTSL 5 BASIC32.65■■■□□ 2.82
CUX2O14529 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CUX2O14529 AF106564.1-201ENST00000607058 2553 ntBASIC32.64■■■□□ 2.82
CUX2O14529 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CUX2O14529 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC32.64■■■□□ 2.82
CUX2O14529 CD63-204ENST00000546939 779 ntTSL 3 BASIC32.64■■■□□ 2.82
CUX2O14529 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC32.64■■■□□ 2.82
CUX2O14529 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC32.64■■■□□ 2.82
CUX2O14529 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC32.64■■■□□ 2.82
CUX2O14529 TBC1D3P2-202ENST00000577902 1649 ntBASIC32.64■■■□□ 2.82
CUX2O14529 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC32.64■■■□□ 2.81
CUX2O14529 BID-203ENST00000399765 1879 ntTSL 2 BASIC32.63■■■□□ 2.81
CUX2O14529 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CUX2O14529 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CUX2O14529 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CUX2O14529 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC32.63■■■□□ 2.81
CUX2O14529 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CUX2O14529 COA5-202ENST00000409997 557 ntTSL 4 BASIC32.63■■■□□ 2.81
CUX2O14529 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CUX2O14529 AC040169.1-201ENST00000565382 521 ntBASIC32.63■■■□□ 2.81
CUX2O14529 MIR1199-201ENST00000621445 119 ntBASIC32.63■■■□□ 2.81
CUX2O14529 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
CUX2O14529 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC32.63■■■□□ 2.81
CUX2O14529 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CUX2O14529 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC32.63■■■□□ 2.81
CUX2O14529 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CUX2O14529 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms