Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.36■□□□□ 0.85
O00370 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
O00370 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
O00370 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
O00370 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.35■□□□□ 0.85
O00370 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
O00370 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
O00370 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.35■□□□□ 0.85
O00370 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.35■□□□□ 0.85
O00370 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.35■□□□□ 0.85
O00370 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.35■□□□□ 0.85
O00370 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.35■□□□□ 0.85
O00370 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.35■□□□□ 0.85
O00370 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.35■□□□□ 0.85
O00370 AC130371.2-201ENST00000619443 611 ntBASIC20.35■□□□□ 0.85
O00370 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
O00370 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
O00370 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
O00370 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.34■□□□□ 0.85
O00370 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.34■□□□□ 0.85
O00370 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.34■□□□□ 0.85
O00370 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
O00370 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.34■□□□□ 0.85
O00370 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.34■□□□□ 0.85
O00370 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
O00370 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
O00370 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.34■□□□□ 0.85
O00370 AC011298.2-201ENST00000617989 482 ntBASIC20.34■□□□□ 0.85
O00370 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 FSCN1P1-201ENST00000568912 1481 ntBASIC20.34■□□□□ 0.85
O00370 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.34■□□□□ 0.85
O00370 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.34■□□□□ 0.85
O00370 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.34■□□□□ 0.85
O00370 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
O00370 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
O00370 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
O00370 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
O00370 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
O00370 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
O00370 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.33■□□□□ 0.85
O00370 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
O00370 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
O00370 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
O00370 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
O00370 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
O00370 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
O00370 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
O00370 TSPY23P-201ENST00000440136 739 ntBASIC20.33■□□□□ 0.85
O00370 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.33■□□□□ 0.85
O00370 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.33■□□□□ 0.85
O00370 AP003071.4-201ENST00000562276 1284 ntBASIC20.33■□□□□ 0.85
O00370 MIR4497-201ENST00000583208 89 ntBASIC20.33■□□□□ 0.85
O00370 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.33■□□□□ 0.85
O00370 REXO1L10P-201ENST00000615707 1290 ntBASIC20.33■□□□□ 0.85
O00370 REXO1L12P-201ENST00000622156 912 ntBASIC20.33■□□□□ 0.85
O00370 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
O00370 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
O00370 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.33■□□□□ 0.84
O00370 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
O00370 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.33■□□□□ 0.84
O00370 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.33■□□□□ 0.84
O00370 AL049812.1-201ENST00000432563 2267 ntBASIC20.33■□□□□ 0.84
O00370 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.33■□□□□ 0.84
O00370 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
O00370 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
O00370 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.32■□□□□ 0.84
O00370 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
O00370 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
O00370 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.32■□□□□ 0.84
O00370 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
O00370 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
O00370 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.32■□□□□ 0.84
O00370 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.32■□□□□ 0.84
O00370 AL596275.1-201ENST00000423464 877 ntBASIC20.32■□□□□ 0.84
O00370 TSPY21P-201ENST00000433481 731 ntBASIC20.32■□□□□ 0.84
O00370 AL355355.2-201ENST00000442321 338 ntBASIC20.32■□□□□ 0.84
O00370 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms