Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 TSPY23P-201ENST00000440136 739 ntBASIC18.85■□□□□ 0.61
CACNB4O00305 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
CACNB4O00305 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CACNB4O00305 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNB4O00305 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNB4O00305 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNB4O00305 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CACNB4O00305 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNB4O00305 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CACNB4O00305 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.85■□□□□ 0.61
CACNB4O00305 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNB4O00305 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNB4O00305 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.85■□□□□ 0.61
CACNB4O00305 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CACNB4O00305 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNB4O00305 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNB4O00305 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 BX664615.1-201ENST00000443558 458 ntBASIC18.84■□□□□ 0.61
CACNB4O00305 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNB4O00305 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.84■□□□□ 0.61
CACNB4O00305 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNB4O00305 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
CACNB4O00305 AL590326.2-201ENST00000625139 305 ntBASIC18.84■□□□□ 0.61
CACNB4O00305 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.84■□□□□ 0.61
CACNB4O00305 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.84■□□□□ 0.61
CACNB4O00305 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
CACNB4O00305 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CACNB4O00305 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CACNB4O00305 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.83■□□□□ 0.61
CACNB4O00305 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.83■□□□□ 0.61
CACNB4O00305 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CACNB4O00305 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CACNB4O00305 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CACNB4O00305 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.83■□□□□ 0.61
CACNB4O00305 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB4O00305 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB4O00305 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNB4O00305 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.83■□□□□ 0.6
CACNB4O00305 AP003041.3-201ENST00000527151 707 ntBASIC18.83■□□□□ 0.6
CACNB4O00305 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB4O00305 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CACNB4O00305 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB4O00305 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CACNB4O00305 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.83■□□□□ 0.6
CACNB4O00305 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNB4O00305 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CACNB4O00305 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.83■□□□□ 0.6
CACNB4O00305 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB4O00305 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CACNB4O00305 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CACNB4O00305 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CACNB4O00305 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.83■□□□□ 0.6
CACNB4O00305 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNB4O00305 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CACNB4O00305 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 Z82202.1-201ENST00000623446 1880 ntBASIC18.82■□□□□ 0.6
CACNB4O00305 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.82■□□□□ 0.6
CACNB4O00305 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNB4O00305 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNB4O00305 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNB4O00305 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNB4O00305 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.82■□□□□ 0.6
CACNB4O00305 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CACNB4O00305 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNB4O00305 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNB4O00305 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.82■□□□□ 0.6
CACNB4O00305 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CACNB4O00305 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNB4O00305 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNB4O00305 AC125437.2-201ENST00000625180 2167 ntBASIC18.81■□□□□ 0.6
CACNB4O00305 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNB4O00305 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms