Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.81■□□□□ 0.6
TRBV5-4A0A0C4DH59 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 FITM1-202ENST00000559294 800 ntBASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRBV5-4A0A0C4DH59 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 TSPY15P-201ENST00000457163 923 ntBASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 AP000525.1-201ENST00000608286 694 ntBASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRBV5-4A0A0C4DH59 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 CRYGFP-201ENST00000418459 633 ntBASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 CA15P1-201ENST00000481698 905 ntBASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRBV5-4A0A0C4DH59 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-4A0A0C4DH59 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRBV5-4A0A0C4DH59 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-4A0A0C4DH59 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-4A0A0C4DH59 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRBV5-4A0A0C4DH59 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.77■□□□□ 0.6
TRBV5-4A0A0C4DH59 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms