Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 AC233279.1-201ENST00000455300 423 ntBASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 HMGN1P11-201ENST00000508668 303 ntBASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 COX6B1P5-201ENST00000509843 249 ntBASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 AC109479.2-201ENST00000517842 174 ntBASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 H3F3AP1-201ENST00000559984 334 ntBASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 AC064801.1-201ENST00000612025 407 ntBASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 MIR6806-201ENST00000622141 64 ntBASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 SCARNA4-202ENST00000625402 129 ntBASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
GTF3C3Q9Y5Q9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 ZFRP1-201ENST00000457579 2970 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 Y_RNA.387-201ENST00000383918 102 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AL138878.1-201ENST00000405131 347 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 MIR1183-201ENST00000408856 89 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 RNA5SP38-201ENST00000410750 119 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 SNORA74C-2-201ENST00000411179 201 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-293P-201ENST00000411259 106 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 SKA2P1-201ENST00000425592 390 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AC011742.1-201ENST00000431448 434 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AL645568.3-201ENST00000433683 316 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 NUTF2P3-201ENST00000448540 384 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 Y_RNA.635-201ENST00000459041 101 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AC104472.2-201ENST00000469035 601 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AL132838.2-201ENST00000492041 314 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 RPS27P27-201ENST00000498779 255 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AC096745.1-201ENST00000509945 370 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 SNORA31.1-201ENST00000515993 133 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 SNORA31.5-201ENST00000516190 133 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AC133555.2-201ENST00000550213 292 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 MIR4474-201ENST00000579189 78 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AC022726.1-201ENST00000587475 207 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AL359091.2-201ENST00000609303 556 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 Z69720.2-201ENST00000624755 279 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 ZNF519P1-201ENST00000449011 1626 ntBASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
GTF3C3Q9Y5Q9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 U3.30-201ENST00000391308 210 ntBASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 RNU6-1077P-201ENST00000410506 102 ntBASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 RPL37P10-201ENST00000412884 288 ntBASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 COPS8P3-201ENST00000526024 482 ntBASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 CYCSP39-201ENST00000565821 309 ntBASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 MIR4505-201ENST00000582238 73 ntBASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 MIR4795-201ENST00000584182 89 ntBASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 TNPO1P3-201ENST00000436471 2662 ntBASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.87□□□□□ -1.47
GTF3C3Q9Y5Q9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 AC138393.1-203ENST00000327086 343 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 SNORA37-201ENST00000384504 129 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 SNORD66.1-201ENST00000391230 76 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 AL391417.1-201ENST00000404100 426 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 AC236972.2-201ENST00000434979 310 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 UBE2V1P7-201ENST00000446395 340 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 RPL23AP62-201ENST00000463396 453 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 AP000676.2-201ENST00000529711 301 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 AL355375.2-201ENST00000574825 175 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 AC008121.1-201ENST00000603244 268 ntBASIC5.86□□□□□ -1.47
GTF3C3Q9Y5Q9 MIR6780B-201ENST00000610307 79 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms